| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5791 |
|---|
| Symbol | cyoC |
|---|
| ID | 4042655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2546822 |
|---|
| End bp | 2547502 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637981210 |
|---|
| Product | cytochrome o ubiquinol oxidase subunit III |
|---|
| Protein accession | YP_587919 |
|---|
| Protein GI | 94314710 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | [TIGR02842] cytochrome o ubiquinol oxidase, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0858154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAT CCCTGAAACT CCGGGCCGAC GCAGCGCCCG GCATCCATGC GCCGGGCCAT
GCGTCCGACG CCCACGGCCA TGACGCTGCC CACGGTCACG ACGGACACGA CGATCACGTG
GTGCAGTCGC GCACCACGCT GGGCTTCTGG CTCTATCTGA TGAGCGACTG CCTGATCTTC
GCGGTGCTGT TCGCGACGTT CGGCGTGCTG GTCAACAACA CCGCGGGCGG CCCGGGCGGG
CGCGAACTGT TCGACCTGCG CTTCGTGCTC GGTGAAACGA TGCTGCTGCT GACCAGCAGC
CTGACCTTCG GCGTGGCGAT GATCAAGTTG GAGGACGGCA AGGCCAATCC GAACCAGGTG
ATCCGCTGGA TAGTGCTGAC GTTCGCGCTC GGCGCGGCGT TCGTCGGCAT GGAGATCTTC
GAGTTCATGG AACTGATTCA CGAAGGGGCG GGCCCGGGCC GCAGCGCCTA TCTGTCGGCG
TTCTTCATGC TGGTGGGCAC GCACGGCCTG CACGTCACGG CCGGGCTGCT CTGGATCATC
GTGATGGTGC ACCAGATCCA GGTGTTCGGC CTCGACGGCA TCGTGCGTCG ACGCCTGGCC
TGCCTGAGCC TGTTCTGGCA CTTCCTGGAT CTCGTGTGGA TCTGCGTTTT CTCCATCGTC
TACCTGAGGA CCTTCCTGTG A
|
|---|
| Protein sequence | MTTSLKLRAD AAPGIHAPGH ASDAHGHDAA HGHDGHDDHV VQSRTTLGFW LYLMSDCLIF
AVLFATFGVL VNNTAGGPGG RELFDLRFVL GETMLLLTSS LTFGVAMIKL EDGKANPNQV
IRWIVLTFAL GAAFVGMEIF EFMELIHEGA GPGRSAYLSA FFMLVGTHGL HVTAGLLWII
VMVHQIQVFG LDGIVRRRLA CLSLFWHFLD LVWICVFSIV YLRTFL
|
|---|
| |