Gene Rmet_5786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5786 
Symbol 
ID4042650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2543642 
End bp2544904 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content64% 
IMG OID637981205 
Productbeta-lactamase family protein 
Protein accessionYP_587914 
Protein GI94314705 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0584533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGC AAGGCAGGGA AACGCAGGGG ATGTCCCGGG AGCGGCTGGG GCGGATCGAT 
CGTTTCATCA ATGAAGCGTA TATCGCCAAC GGCAAGCTAC CGTGCGCGCT GACCCAGGTG
TGGCGGCGTG GCGAGCTGGT GTTGAACTCG GTGCTGGGCC AGGCCGACCG CGAGCGGCAG
GTGCCGCTGG CCGAGGACTC GATCTTCCGC ATCTACTCGA TGACCAAGCC GATCACCTCG
GTGGCGATCA TGATGCTGCT CGAGGAATGC AAGATCGCGC TTGACGATCC GGTCAGCAAG
TACATTCCCG CATGGGAAAA CCTCGGCGTC TTCACCGGCG GCTTCATGGA GAGCTTCCAG
ACGCGCGCGC CAGCACGACC GATGCAGGTG GTCGACCTGC TGCGCCACAC CTCTGGACTG
ACCTACGGCT TCCAGCAGAA CACCAATGTC GATGCCGCCT ATCGCAGGCT GAAGCTGGGC
GACATCGCCA CGGACGGCAC GCTCGACGAC ATGATCGAGA AGCTGGCCAC GCTGCCGCTA
GAGTTCTCGC CGGGCGAGGC CTGGAACTAC TCGGTATCGA CCGACGTGCT GGGCTACCTG
GTCGGCAAGA TCAGCGGCAT GCCGTTCGAG ACCTTCCTGA AGGAACGCAT CTTCGATCCG
CTGGGCATGG TCGATACCGC GTTCCACGTA CCCGAGGACA AGGTATCGCG CTTCTGCGCG
TGCTACGCCA TCGGCGCGCT GGGTTCGAAG GTCATTTCGC CGCGTGGGCC GATGCTCCAG
GACGATCCTC TGGCCAGCAC CTACCTGAAG CCGCCCAGCT TTGTCTCGGG TGGCGGTGGT
CTGGTGTCGA CGGCGGCGGA CTACATGTGC TTCGCACGCA TGTTGCTGCA GGGTGGCGAA
CTCGATGGCG CGCGCCTGCT GAGTCCGAAG ACCCTGGCGC TGATGACCGC CAACCATCTG
CCGGGCGGTG TGGATCTGCC GCGCATGTCC CGCTCGATGT TCAGCGAGGC CACCTACGAA
GGCGTCGGAT TCGGACTCGG CTTCGCCACG ACGCTCACGC CAGCCACCAC GCTGATTCCC
GGCAGCGCCG GAGACTTCTT CTGGGGCGGC GCGGCCAGCA CCTTCTTCTG GGTCGATCCT
GAGGAAGACC TGATCGGCCT CTTCCTGACC CAGCTCCTGC CGTCGTCGGC CTATCCCGTG
CGCCGCCAAT TGCGCACGAT GGTCTACAGC GCGATCACGG AGCCGGGCGC CGGTGCGCGC
TGA
 
Protein sequence
MDMQGRETQG MSRERLGRID RFINEAYIAN GKLPCALTQV WRRGELVLNS VLGQADRERQ 
VPLAEDSIFR IYSMTKPITS VAIMMLLEEC KIALDDPVSK YIPAWENLGV FTGGFMESFQ
TRAPARPMQV VDLLRHTSGL TYGFQQNTNV DAAYRRLKLG DIATDGTLDD MIEKLATLPL
EFSPGEAWNY SVSTDVLGYL VGKISGMPFE TFLKERIFDP LGMVDTAFHV PEDKVSRFCA
CYAIGALGSK VISPRGPMLQ DDPLASTYLK PPSFVSGGGG LVSTAADYMC FARMLLQGGE
LDGARLLSPK TLALMTANHL PGGVDLPRMS RSMFSEATYE GVGFGLGFAT TLTPATTLIP
GSAGDFFWGG AASTFFWVDP EEDLIGLFLT QLLPSSAYPV RRQLRTMVYS AITEPGAGAR