Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5786 |
Symbol | |
ID | 4042650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2543642 |
End bp | 2544904 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637981205 |
Product | beta-lactamase family protein |
Protein accession | YP_587914 |
Protein GI | 94314705 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0584533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGC AAGGCAGGGA AACGCAGGGG ATGTCCCGGG AGCGGCTGGG GCGGATCGAT CGTTTCATCA ATGAAGCGTA TATCGCCAAC GGCAAGCTAC CGTGCGCGCT GACCCAGGTG TGGCGGCGTG GCGAGCTGGT GTTGAACTCG GTGCTGGGCC AGGCCGACCG CGAGCGGCAG GTGCCGCTGG CCGAGGACTC GATCTTCCGC ATCTACTCGA TGACCAAGCC GATCACCTCG GTGGCGATCA TGATGCTGCT CGAGGAATGC AAGATCGCGC TTGACGATCC GGTCAGCAAG TACATTCCCG CATGGGAAAA CCTCGGCGTC TTCACCGGCG GCTTCATGGA GAGCTTCCAG ACGCGCGCGC CAGCACGACC GATGCAGGTG GTCGACCTGC TGCGCCACAC CTCTGGACTG ACCTACGGCT TCCAGCAGAA CACCAATGTC GATGCCGCCT ATCGCAGGCT GAAGCTGGGC GACATCGCCA CGGACGGCAC GCTCGACGAC ATGATCGAGA AGCTGGCCAC GCTGCCGCTA GAGTTCTCGC CGGGCGAGGC CTGGAACTAC TCGGTATCGA CCGACGTGCT GGGCTACCTG GTCGGCAAGA TCAGCGGCAT GCCGTTCGAG ACCTTCCTGA AGGAACGCAT CTTCGATCCG CTGGGCATGG TCGATACCGC GTTCCACGTA CCCGAGGACA AGGTATCGCG CTTCTGCGCG TGCTACGCCA TCGGCGCGCT GGGTTCGAAG GTCATTTCGC CGCGTGGGCC GATGCTCCAG GACGATCCTC TGGCCAGCAC CTACCTGAAG CCGCCCAGCT TTGTCTCGGG TGGCGGTGGT CTGGTGTCGA CGGCGGCGGA CTACATGTGC TTCGCACGCA TGTTGCTGCA GGGTGGCGAA CTCGATGGCG CGCGCCTGCT GAGTCCGAAG ACCCTGGCGC TGATGACCGC CAACCATCTG CCGGGCGGTG TGGATCTGCC GCGCATGTCC CGCTCGATGT TCAGCGAGGC CACCTACGAA GGCGTCGGAT TCGGACTCGG CTTCGCCACG ACGCTCACGC CAGCCACCAC GCTGATTCCC GGCAGCGCCG GAGACTTCTT CTGGGGCGGC GCGGCCAGCA CCTTCTTCTG GGTCGATCCT GAGGAAGACC TGATCGGCCT CTTCCTGACC CAGCTCCTGC CGTCGTCGGC CTATCCCGTG CGCCGCCAAT TGCGCACGAT GGTCTACAGC GCGATCACGG AGCCGGGCGC CGGTGCGCGC TGA
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Protein sequence | MDMQGRETQG MSRERLGRID RFINEAYIAN GKLPCALTQV WRRGELVLNS VLGQADRERQ VPLAEDSIFR IYSMTKPITS VAIMMLLEEC KIALDDPVSK YIPAWENLGV FTGGFMESFQ TRAPARPMQV VDLLRHTSGL TYGFQQNTNV DAAYRRLKLG DIATDGTLDD MIEKLATLPL EFSPGEAWNY SVSTDVLGYL VGKISGMPFE TFLKERIFDP LGMVDTAFHV PEDKVSRFCA CYAIGALGSK VISPRGPMLQ DDPLASTYLK PPSFVSGGGG LVSTAADYMC FARMLLQGGE LDGARLLSPK TLALMTANHL PGGVDLPRMS RSMFSEATYE GVGFGLGFAT TLTPATTLIP GSAGDFFWGG AASTFFWVDP EEDLIGLFLT QLLPSSAYPV RRQLRTMVYS AITEPGAGAR
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