| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5751 |
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| Symbol | |
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| ID | 4042615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2511748 |
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| End bp | 2513736 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981170 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_587879 |
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| Protein GI | 94314670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGT TACTGCCGTC GCTCAAGGTA CGCATTGCGC TGATCACCAC GGTGCTTGCC
GGCATTCTCG GCGGAGGCAT CGTCATCGGC TCGCTCTACT TCGCCCATCT CGATCTCGAA
GACGCGCTGC AGAATCAGCA GGACTCCATC GTCAAGCTAT CGGTGGACCA GCTCGACACG
GCGATGGATG ACCGTATCGA GCTGCTCTCC CACCTGGCAC CGCAACTGCG CGACACGCTC
GCTTCCGCGC ATGAGCAGCC ACACGATGCC GTACGGGCGG CGCTACAGCA GGCAATCGAC
CGCACGATAC CAATGCCCGA GGCGTTCAAT GCCGTGATGG TCGTCGACGC GGCTGGCACA
GTCCTGACCA TGGACGGCAA GCCCGTCGAG GTGGGTGACC GCGCCTACTT CCTCGAGGCC
ATTCGCACGC GCAATGTCGT GGTTGCCGCG CCGATCCGCT CCCGCGTCGG CGGCTATGTG
GGCGTCCTGG TGGCGGTACC GGTGCTCTCG TTGTCCGGCG AGTTCCTGGG CGTCGCGGGG
GGCTGGCTCA ACCTTGCCAA CTCGAACTTC CTGGTGGAAA TCGCCAATAA CCGGCTGGGC
ACCACGGGCT TCTACTGCCT GGTGTCGGCC GGCAGCGAAC CCGTCTATGT CCAGCATCCG
GACCCCACCA TGGCGCGCAA GCCCGCCCAC GCCGTTGGCG AGACCTGCGG CGTGGACGAT
CACAGCGCGC CGCTGGAATT TCTCACCCCG ACCCGGCCCG TGATCGCCCG CCGGCTGATG
GCAAGCACGG GCTGGGAACT CGTGGCCGTG ATGCCGGCAC AGGAAGCCTA TGCGCCACTG
CGCCAGATGC AGCGTCGATT CCTGATGATG TCGGCCATCG CCCTGTCGGT GGTGGCGCTG
CTGATCTGGC TGGCGGTACG CCAGTTGCTG ACGCCGCTTT CTCGCCTGCA TCAGGTGGTG
CAGGCGAGCG CGAACGACCT GGATGCATTT CAGCGCTTGC CAAAGCGTCC GCACCGCGAC
GAGATCGGCG ATGTCACCGG CGCCTTCATC CGCCTGATGC GTGACATGCG CCAGCGCGGA
CTGCAACTGG CACGCAGCGA ACGGCGGCTG CGCGCGGTCA CCGACACGCT CCCGGCACTG
CTGGCCTTCA TCGACAGCGA CGAACGCTAC GTCTTCAACA ACATCGCCTA CGAGCGTGTG
TTCGGTATGT CGCTGGATGA AATCCAGGGC AAGACCGTGC GCGAAGTGCT GGGCGAGGAA
CGATACGCAC GCGCCCAGCC CTTCCTGCAA CGCGCGCTGC GGGGCGAGGA GGTCAGCTTC
GAGGCCGAGT ATCACTTCCC GCATCATCAC TGGATGGAAA TGAACTATCG CCCGGAATGG
GGCGAGGATG GCCGGCAGGT GGTGGGCGTA CACATCCACG TGGAGGACAT CACGCGGCGC
AAGGTGGAGA ATCTGCGGCT GTCGCACATC TCGCGAACGG ACCACCTGAC CCAACTCCAG
AACCGCAACG CCTTCGAAAG CCAGTTGCGG GACGCGATGA TGCTGAGCCG CGCCGAGCAG
CAACTGATGG CCCTGCTTTA TCTGGACATG GATCGCTTCA AGGCCGTCAA CGACATACAC
GGCCATGCCA CCGGCGATCT GCTGCTGCAG GCATTCGCGC TGCGTCTGCG GCGCTGTGTG
CGCGAGAGCG ATCATGTCGC GCGCATCGGC GGGGACGAAT TCGCGGTAAT TCTCGAGGAC
ATCGGCACGC CAGCCACGGC GCAGCGAATT GCCGGCGCGA TCCTGGAATC GGTCGGTCGG
CACTTCTATT TCGATGGAAT ACTGGCCGAC GTCGACGTGA GCATCGGCGT GACTCTCTAC
AAGGGCACGC CGATCAGCGA GGAAACGCTG ATGCGGCAGG CCGATGTACT GCTGTATCGC
GCCAAGGCAC TGGGCCGGGG TCGCTACGAA ATCGGCCCCG CGGAACTGCT GGCAGACGCT
GGGGCCTGA
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| Protein sequence | MPRLLPSLKV RIALITTVLA GILGGGIVIG SLYFAHLDLE DALQNQQDSI VKLSVDQLDT
AMDDRIELLS HLAPQLRDTL ASAHEQPHDA VRAALQQAID RTIPMPEAFN AVMVVDAAGT
VLTMDGKPVE VGDRAYFLEA IRTRNVVVAA PIRSRVGGYV GVLVAVPVLS LSGEFLGVAG
GWLNLANSNF LVEIANNRLG TTGFYCLVSA GSEPVYVQHP DPTMARKPAH AVGETCGVDD
HSAPLEFLTP TRPVIARRLM ASTGWELVAV MPAQEAYAPL RQMQRRFLMM SAIALSVVAL
LIWLAVRQLL TPLSRLHQVV QASANDLDAF QRLPKRPHRD EIGDVTGAFI RLMRDMRQRG
LQLARSERRL RAVTDTLPAL LAFIDSDERY VFNNIAYERV FGMSLDEIQG KTVREVLGEE
RYARAQPFLQ RALRGEEVSF EAEYHFPHHH WMEMNYRPEW GEDGRQVVGV HIHVEDITRR
KVENLRLSHI SRTDHLTQLQ NRNAFESQLR DAMMLSRAEQ QLMALLYLDM DRFKAVNDIH
GHATGDLLLQ AFALRLRRCV RESDHVARIG GDEFAVILED IGTPATAQRI AGAILESVGR
HFYFDGILAD VDVSIGVTLY KGTPISEETL MRQADVLLYR AKALGRGRYE IGPAELLADA
GA
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