| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5734 |
|---|
| Symbol | kdsB |
|---|
| ID | 4042598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 2494108 |
|---|
| End bp | 2494851 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637981153 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_587862 |
|---|
| Protein GI | 94314653 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGGC AGGATGGCGA GAGCGTTGTC ATCGTCATTC CCGCGCGCTA CGGATCGACG
CGCTTGCCTG GCAAGCCGTT GCTGGATATT GCCGGCAAAC CGATGATTCA GCACGTCTAT
GAGCGTGCAC GTTTGGTGCG CGGCGTAAAT GCCGTGGTGG TTGCCACGGA TGACTCGCGC
ATCGAGTCGG CGGTTCTGGC ATTCGGCGGG AGCTGTCTGA TGACGTCCGC CGGGCACCAG
TCGGGAACTG ACCGCCTTTG CGAAGTCATG CGCATGGTGC ACGCGGACCT CTACATCAAC
TTGCAGGGTG ACGAGCCGCT GGTGCGTCCA ACGGACATCG AACTGCTGGC GAACCTGATG
ATCGCCGATC CGACCTCCGA CGTAGGCACG CTTTGCCATG AGTTCTCGCT GGAGGAAGCC
CGCGACGAAA ATGCCGTGAA GGTGGTGATG TCGAACGAAG GTGATGCGCT GTACTTCAGT
CGCTCATTGA TCCCCTACCC GCGCGATGGC GCCTTTGCGC GCTACTACAA GCATTCGGGT
GTCTACGCTT TTCGGAGAAG GGTGCTTGAG GTCTACGGGA GCATGCCCCA GCCGATGGCC
GAACAAGCGG AGCGGTTGGA GCAATTGAGG CTGCTTGCGG CAGGCTTCCG CATACGGATG
CAGGTGGTGC CTCCCATCGG AACTGGTGTC GATACTCCCG CTTGCCTGGA GCGTGTCCGG
GCCATTCTTG ATCCCGCTGT TTGA
|
|---|
| Protein sequence | MTRQDGESVV IVIPARYGST RLPGKPLLDI AGKPMIQHVY ERARLVRGVN AVVVATDDSR
IESAVLAFGG SCLMTSAGHQ SGTDRLCEVM RMVHADLYIN LQGDEPLVRP TDIELLANLM
IADPTSDVGT LCHEFSLEEA RDENAVKVVM SNEGDALYFS RSLIPYPRDG AFARYYKHSG
VYAFRRRVLE VYGSMPQPMA EQAERLEQLR LLAAGFRIRM QVVPPIGTGV DTPACLERVR
AILDPAV
|
|---|
| |