Gene Rmet_5718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5718 
SymboltnpA 
ID4042582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2475823 
End bp2476851 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID637981137 
Producttransposase IS1088 
Protein accessionYP_587846 
Protein GI94314637 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA AAAATTACCA GCAGTTGAGT GAGACCGAAC GCCATGCGAT AGCCCTGGGG 
CTGCAGCAAA AGCAAAGCCT CAGCGCCATA GCCAGGGCCC TGGGGCGTGA CAAGAGCACT
ATCAGCCGCG AGTGCAATCG CAATGCAGGC GGCAAGGGCT ACGCCTCCAA GTTCGCCCAG
CAGCGCAGTG ACAATCGCAA ACGCCAAGCC CGTCCCAGCC CCAAGCTGCA CCGCCAAGGG
CCCTTGTTCC CGCTGGTTTG CGACTACCTG CGCCACAAGT GGTCGCCCCA GCAAATCGCC
AACGAACTCC AGCGTCTTCA CCCACAGGAT CGCCGCTTGC AAGCCTCACA CGAAAGCATC
TACACCTGCA TCTACGCCCA GCCCCGGGGA GAGCTCAAGA AGGAGCTGGT GTCCTGCCTG
CGCATGGCCC ACGCCAAACG TTGGCCCCGC TCCAGGGGAA AGGATCGCCG CAAGGAGACG
CAAGACTTGC TGAGCATCCA TGTGCGAGCA CCCGAGATCG AGGATCGCCA GTTGCCCGGC
CACTGGGAGG GTGATCTGAT CAAAGGCAAG GCTAACGCCA GTGCGATTGG CACGCTGGTC
GAGCGCACCA CCCGTCTGGT GGTGCTGGTC AAGCTGCCAC ACCCCAACCC CGCCACAGCG
GCGCATGTAC TGCAAGCCTT CAGCGACAAG CTCAAGACAA TAGCCCAGCC GATGCGCCAG
ACCCTGACCT ACGACCGGGG CAGCGAGATG GCCGAGCACC GCCAGCTCAG CGAGAACACA
GGCATGAAGG TGTACTTCTG CGACCCCTAC AGTCCCTGGC AAAGGGGGAG CAACGAGAAC
ACCAATGGGC TCTTGCGCCA GTACTTCCCC AAGGGGACTG ATCTGAGTGG CTACAGCCAG
GAGCAGTTGG ACGCTGTGGC CGATGAGCTC AATGGACGGC CCAGGATGAC TCTGGGGTGG
CGCAAGCCCA TCGAGGTCTA TGCCGAGCAT TTGGCGCGGC TGGCCCAGCA GCCGGATTTA
GTGCATTGA
 
Protein sequence
MTKKNYQQLS ETERHAIALG LQQKQSLSAI ARALGRDKST ISRECNRNAG GKGYASKFAQ 
QRSDNRKRQA RPSPKLHRQG PLFPLVCDYL RHKWSPQQIA NELQRLHPQD RRLQASHESI
YTCIYAQPRG ELKKELVSCL RMAHAKRWPR SRGKDRRKET QDLLSIHVRA PEIEDRQLPG
HWEGDLIKGK ANASAIGTLV ERTTRLVVLV KLPHPNPATA AHVLQAFSDK LKTIAQPMRQ
TLTYDRGSEM AEHRQLSENT GMKVYFCDPY SPWQRGSNEN TNGLLRQYFP KGTDLSGYSQ
EQLDAVADEL NGRPRMTLGW RKPIEVYAEH LARLAQQPDL VH