| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5711 |
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| Symbol | |
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| ID | 4042575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2470520 |
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| End bp | 2471986 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637981130 |
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| Product | Tetratricopeptide TPR_2 domain-containing protein |
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| Protein accession | YP_587839 |
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| Protein GI | 94314630 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGAG ACTGGCGGAA GAGAACGCCG GAATCCGTAG ATGCGATCGT TGCGCAGGCC
GCGCTGGACG TGGAACTCGG CGACACGGCA AGCGCAAGAA CCGCTCTTGA ACAGGTACTT
GCCACAGTCC CGAATCACCC GCGGGCGCTG GCAGGCTTGG CTCATCTGGC CCTGTGCGCC
GGGGATGCGA AATCGGCCGT GGACTGGTTT CAGCAAACCG GCCCGGAAGC ACTTGATGAA
GCTGAATTGT CCGATTGGTG CGAAGCACTT ACGGCTACGG GCGACCTGAC GCACGGCGCG
GACATTGCCA GGCATCTTTG CGAACGCGCA CCCAAAGCCG CGACGTCCTG GTTTCAACTC
GGGCTCACCC TGCATCACAG CGGCTTCCAC GAGCAGGCAC TGGATGCCTA TCCCAAAGCA
CATGCGCTAG ACCCTGACCT CGACAATCTC TGCAACAACA TCGGCGCCGC ATATCTGCAA
TCAGGCCGGA CCGAAGAAGC CATGACACCG ATCCGTCGGG CCATCGAGCT GAAGCCTTCC
AATCCCCTGG CGTGGATCAA CCTGTCGGAT GCCTTGCTGA AACTGCGTCG CCCGGATGAC
GCCGCGTTGG CGGCCCGGCG CGCCTGCGCC CTGGCCCCAA CGATGCCGCT CGCCTTGCAA
GCGCAATCCA ATGCGCTCAA GGACCTTGGC CAATGGGCAG ATGCGCTGGC CCTGATGGAG
AAGGCAGCGA TGCAGGCGCC AGTTTCGGGC GGCATCATCT GGAATCTCGC CATGCTACAA
ATGCTGCACG GCGACTATCG CAATGGCCTG ATCAATTTCG AACACCGCTG GGCTTCGCCA
GAACTGGCGG GAACATTCCC GGATCTGAAG GCACCGATCC GGCGTGGCGA ATCCCTCGCT
GGCAAGACGC TGTTTCTGTG GGGCGAACAG GGCTTCGGTG ACGCGATGCA GTTTGTCCGC
TTCGTTCCCG GGATTGCGGA GTTCGTCAGA CAGCAAGGTG GACAGTTGTA CTACTGCTGC
TTCTCGAAGC TTCATACCTT GTTCTCGCGC GGTCTTGCGG ACGTGACCCC GGAGGTCATC
CCGCATGACA CTCCCAGTCT GCCCCGCTTC GGCTATCACC TGCCGCTTTG TAGCGCGCCT
CTAAGACTTG GCACCGAACT GGATACGTTG CCCGCCGATG TGCCATATCT GCGTGCGGAT
GCTGCCGCCG CAAGCGCGTG GGCGCAACGC CTGTCGGCGT CTGGCAAGCT CAACGTCGGC
GTGGTCTGGA GCGGCAGCCG TGGCCACCAG CGCAATCCGC TTCGCGCGGT GCCTGTCGCT
GAGCTGGCCG GGGCGCTCAG CGACCTTCCC GGCATCGAGT TCCACAGCAT GCAGATCGAT
GGGGGGCGGA ACTGGCAAGC GTCCCCGATT TCGATATCCG TGATCACACT GCGGAACTGC
GAAGCTACGA CGACACCGCC GCACTGA
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| Protein sequence | MIRDWRKRTP ESVDAIVAQA ALDVELGDTA SARTALEQVL ATVPNHPRAL AGLAHLALCA
GDAKSAVDWF QQTGPEALDE AELSDWCEAL TATGDLTHGA DIARHLCERA PKAATSWFQL
GLTLHHSGFH EQALDAYPKA HALDPDLDNL CNNIGAAYLQ SGRTEEAMTP IRRAIELKPS
NPLAWINLSD ALLKLRRPDD AALAARRACA LAPTMPLALQ AQSNALKDLG QWADALALME
KAAMQAPVSG GIIWNLAMLQ MLHGDYRNGL INFEHRWASP ELAGTFPDLK APIRRGESLA
GKTLFLWGEQ GFGDAMQFVR FVPGIAEFVR QQGGQLYYCC FSKLHTLFSR GLADVTPEVI
PHDTPSLPRF GYHLPLCSAP LRLGTELDTL PADVPYLRAD AAAASAWAQR LSASGKLNVG
VVWSGSRGHQ RNPLRAVPVA ELAGALSDLP GIEFHSMQID GGRNWQASPI SISVITLRNC
EATTTPPH
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