| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5687 |
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| Symbol | pilW |
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| ID | 4042551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2443937 |
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| End bp | 2444980 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981106 |
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| Product | Type IV fimbrial biogenesis pilW-related transmembrane protein |
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| Protein accession | YP_587815 |
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| Protein GI | 94314606 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGG CGCATCATGC AGCCGTGCTG CACCTGAGGA GCCGGCAACG CGGTTTCTCG
CTGGTCGAGC TGATGGTGGC CATCACGCTC ACCCTGATCA TCCTGACCGC GCTTTCGGCG
CTCTACCTCA ATACCAGCAC GACGCGCAAC GAGTTCGCCA ACAGCGCCGA CCAGATGGAA
AACGGCCGGT ACGTGCTCGA CACGATGACC CGCGAGCTCG AGCTTGCAGG CTTCTTCGGC
CCGACCAACC TCTCCACCAA GGCGCTGGTC TCGAGCCCCG ACGTCTGCGC CACCGATCCC
AGCGCGCTCG GCTTCTCGGG GTCGCCTGTC ACGATGCCGC TTGGCGTGCA GGGCTTCGCG
CCTGGCACCA TCGCGCCGTG CCTGTCGAAT CTGCTGGCAA GTTCCGAGAT CCTGGTGGTT
CGGCGCGTGT CGACCACGCC GGTCAGCGCC GCGGTAACCG GCACACCGTA TCTGCAGGCG
TCCTTTTGCG CGAGCGACAC GTCGCAGATG GTCTTCGGCG CCAGCGCCGC GCAGTTCACC
TTGCGCACCA AGACCTGTGA CAACACCGTG CCGTCTGCTC TGCGCCAGGC GACGGTCCGC
ATCTATTACC TTGCCGGATG CGACCAGTGC GGCGGCAGCG GCGACGGCGT GCCGACGCTG
AAAATGGCCG AGCTAAGCAA CGGCGCATTC CAGATCCAGT CGGTGGCCGT CGGCATCCAG
GACATGCATC TGATCTACGG GGTCGATCTG GATAGCAACG GCTCGCCCGA CTGCTATGTG
GCGGACCCCG GTAGCAACAA TGCCGCGCAA TGCACGACAG TGACGACTTA CGACTGGAGC
GTGCCGCTGA CCAACTGGAA GAACGTGACC GCCATCCGGA TCGGCGTGCT GGCCCGTACC
TCGCGCAAGA CGAACGGCTG GACGGACACG CGCACCTATG ACCTCGGCCG CGCGCAAGCG
GCTGGTCCGT TCAACGACGG CTACAAGCGC CACATCTACG CACAGACGGC CCGCCTGATC
AACGTCGCGG GGAACAGGGA ATGA
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| Protein sequence | MTRAHHAAVL HLRSRQRGFS LVELMVAITL TLIILTALSA LYLNTSTTRN EFANSADQME
NGRYVLDTMT RELELAGFFG PTNLSTKALV SSPDVCATDP SALGFSGSPV TMPLGVQGFA
PGTIAPCLSN LLASSEILVV RRVSTTPVSA AVTGTPYLQA SFCASDTSQM VFGASAAQFT
LRTKTCDNTV PSALRQATVR IYYLAGCDQC GGSGDGVPTL KMAELSNGAF QIQSVAVGIQ
DMHLIYGVDL DSNGSPDCYV ADPGSNNAAQ CTTVTTYDWS VPLTNWKNVT AIRIGVLART
SRKTNGWTDT RTYDLGRAQA AGPFNDGYKR HIYAQTARLI NVAGNRE
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