| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5660 |
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| Symbol | |
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| ID | 4042524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2418767 |
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| End bp | 2421286 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981079 |
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| Product | hypothetical protein |
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| Protein accession | YP_587788 |
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| Protein GI | 94314579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.32582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAC ACACGCTGGA TCTTGAGATC GATCACCTGA TATCGAGATC CATCCTGGAG
TGCGGCCCGC GCACCAGTGT CAGCGAAGTT GTCGCGATGA TGGCGCAGCG CAGTTGCAGT
TCGATCGTCG TGGTGGACCA GGGGCAGGTC GTTGGCATCT GGACCGAGCG GGACGCGCTG
GCGCTCGGCG AGATGGGTGA TGCGCTGTCG CGCCCCATCG CCGAGTTGAT GAGTTATCCC
GTACTGGCGC TGGACTGCCG CACCAGGCTC GGCGATGCCG CGCTGTACTT CAAGAGCAAA
GGCATTCGCC ATTGCCTGGT GGTGGATGAC AGTGGGCGTC CGCTCGGCAT GTTGTCTCAG
ACCGACCTCG TCATGAACCA GGGCGCCGAG TATTTCCTGC GCCTTCGCCC GATTCACTCG
GTCAAGGTTC CGCCTCCGGT CATCGTCGAC CCGGAAGAGA AACTGGCTGC GGTCATGCGT
GTCATGCGCT CGGGCGGATT GAGCGCTGTG GTTGTCCGCT TTCCCGGCGA CGAGTACGGC
ATCCTGACGG AGCGCGACGT CGTGCGGCTG GCCGCCGCCA ACGCGCTCGG CGGCATCGTG
TCGGATCATG CCAGTCGTCA CCTGCATTCG CTGGCGCATT CCAACAGCTT GTATTCGGCC
CGGAAGTTTC TTTCGGACAA CCGTTTGCGC CACGTTGGCG TGCTCGACGC TCAGGGCGAG
CTGACGGGTC TGCTGAGCCT GTCGGACATC CTTTGTGGTA TCGAACACGA GTATGTGCAT
GAACTGCGGA CGGCGCTGCA CGAGCGCGAC GAGGCACTGC GTCGATCCAA CTACCATCTG
CGGCTGGCCG ATCGCGTGTT CGAATCGACG CTCGACGGCG TGATGGTGAC CGATCTGAAT
GGCGTGATCG AGCAGGTGAA CCCGGCCTTC ACGCAACTGA CCGGCTACAC GCTCGACGAG
GCCATCGGCC GGACGCCGCG GATGCTGAGT TCGGGACGCC AGGGTCCATC CTTCTACCAG
GAAATGTGGA GCCAGTTGCG CGCGCAAGGT CACTGGAAGG GCGAGATCTG GAATCGCCGA
AAGAACGGCG AGCTGTACCT CGAGCATCTG TCCGTCTCCA GCATCTGCAA TCAGGCCGGC
GAATGCACGC ATTACGCGGC GATCTTCTCG GACATCACGC ATCGCCGTAT CGCGGAAGAG
CGCCTGAACC ATCTGGCCAT GCACGATCCG CTGACGGACC TGCCGAACCG CACGCTGTTC
AGCGAACGGC TCAAGCAGGC CATCATTCGC GCCCGGCGTG CGTCCAGACG GGTGGGCGTG
TTGTTCCTCG ATCTCGATCG CTTCAAGATG ATCAACGATA CGATGGGGCA CGGCACCGGA
GACGACGCGC TCCGGGTCAT TGCCATGCGA CTCAAGCATG CCGTGCGCGA GAGCGACACG
GTGGCCCGGC TCGGCGGGGA CGAGTTCACG ATCGTTGTCG AGGAGATTGA GGACATTCGT
CATGTCGCGC ATATCGCGCA GGTGCTGCTG GACGTGGTTG GTCAGCCAAT CGATGCTGCC
GGGCGCAGCG TGTTCGTGAC GCCGAGCATC GGCATCAGCA TTTATCCGGA CGACGGCACG
GATCAGCAGC AACTGTTGAT GCAGGCCGAC CGCGCGATGT ATGAAGCCAA GCAGGAAGGC
AAGAACACGT TCCGCTTCTT CGCCACGCAG ATGACATCGT CCGCGATGGA AAGCATGGCG
CTCGAATGCG AACTGCGTCG CGCGCTGACG CGCCGCGAGT TCCGCCTCCA CTATCAACCG
ATCTATGACC TGGGCTCGGG AAGGATCGTC AGCGTCGAAG CACTGCTGCG CTGGCAGCAC
CCGACGCGCG GGCTGCTGTC GCCCGGTGCG TTCATCGACG TGGCCGAGGA ATCGGCGCTG
GTCGTGCCGA TTGGCGCCTG GGTGTTGCGC GAGGCGTGCC GGCAGGGCGC GGCCTGGCTC
CGGTCGGGCT TCGAATTTGG CCGCATGTCG GTCAACCTGT CCGCCCGACA GATCCGCCAC
GAGCATTTCC TGCATGACGT CTCCGATGTG CTGAGCGACG CCGGCATGCA GCCGGAGCAT
CTGCAGCTTG AGCTGGTGGA GAGCATGGCC ATGACCGGAA ACGGCGTGAC CGAGCTGGTG
CTTGGCGAAC TCGCGCGCCG CGGTGTCGGT CTGGCCATCG ACGACTTCGG AACGGGCTAT
TCCTCGTTTA CCTATCTGCA GACGCTGCCG GTCGATACCG TCAAGGTGGA TCGCTCCTTC
CTGACCGCTG TTATCGAGCG GGAGCGCGAC GGCGCGATTC TTCGCGCGAT CGTTGCCATG
GCCCGGGCGC TTGGCCTGAC CGTGGTGGCC GAGGGCGTGG AGAACATCGC CCAACTGCAG
TTTCTGCGCG AGATCGGTTG CGACCGCGCG CAGGGTTTTC TGCTTGCCAG GCCCGGACCG
GCTGAGGCCC TGACCGCCCT GGGCAATGCC GCGCATCCGT TGATCGCCTC GGGTGCCTGA
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| Protein sequence | MPQHTLDLEI DHLISRSILE CGPRTSVSEV VAMMAQRSCS SIVVVDQGQV VGIWTERDAL
ALGEMGDALS RPIAELMSYP VLALDCRTRL GDAALYFKSK GIRHCLVVDD SGRPLGMLSQ
TDLVMNQGAE YFLRLRPIHS VKVPPPVIVD PEEKLAAVMR VMRSGGLSAV VVRFPGDEYG
ILTERDVVRL AAANALGGIV SDHASRHLHS LAHSNSLYSA RKFLSDNRLR HVGVLDAQGE
LTGLLSLSDI LCGIEHEYVH ELRTALHERD EALRRSNYHL RLADRVFEST LDGVMVTDLN
GVIEQVNPAF TQLTGYTLDE AIGRTPRMLS SGRQGPSFYQ EMWSQLRAQG HWKGEIWNRR
KNGELYLEHL SVSSICNQAG ECTHYAAIFS DITHRRIAEE RLNHLAMHDP LTDLPNRTLF
SERLKQAIIR ARRASRRVGV LFLDLDRFKM INDTMGHGTG DDALRVIAMR LKHAVRESDT
VARLGGDEFT IVVEEIEDIR HVAHIAQVLL DVVGQPIDAA GRSVFVTPSI GISIYPDDGT
DQQQLLMQAD RAMYEAKQEG KNTFRFFATQ MTSSAMESMA LECELRRALT RREFRLHYQP
IYDLGSGRIV SVEALLRWQH PTRGLLSPGA FIDVAEESAL VVPIGAWVLR EACRQGAAWL
RSGFEFGRMS VNLSARQIRH EHFLHDVSDV LSDAGMQPEH LQLELVESMA MTGNGVTELV
LGELARRGVG LAIDDFGTGY SSFTYLQTLP VDTVKVDRSF LTAVIERERD GAILRAIVAM
ARALGLTVVA EGVENIAQLQ FLREIGCDRA QGFLLARPGP AEALTALGNA AHPLIASGA
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