Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5632 |
Symbol | |
ID | 4042496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2388348 |
End bp | 2391371 |
Gene Length | 3024 bp |
Protein Length | 1007 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637981051 |
Product | D-lactate dehydrogenase |
Protein accession | YP_587760 |
Protein GI | 94314551 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGC CAACCACCCC CACGCCACCC GGCGTGCAAC CGCTGCGCTT CATGCCCGGC GCGGCGGCAC CCGCCCTGCA ATCGCCGCTG TACCGGCGCC TGGCCGCCGA ACTGCGCGGC GAAGTGTTGT TCGATAACGC CAGCCGTGGC CGCTATGCCA CCGATGCGTC GATCTACCAG GTCATGCCGA TCGGCGTGGT GGTACCGCGC GACGAAGCCG ATGCGCGGCT GGCGCTGGAC ATCGCCCGGG ACTTCAAGGC GCCGCTGCTG CCGCGCGGCG GCGGCACCAG CCAGTGCGGG CAGACCGTGG GCGAGGCGCT GGTCATCGAC AACAGCAAGT ACCTGAACCA GATCATCGAC TTCGATCCGG TGGCGCGCAC GGTGACCGTG CAGCCCGGCA TCGTGCTCGA CCACCTGAAC GCATGGCTCA AGCCCCACGG CCTCTGGTTC CCGGTCGATG TATCGACCGC CGCGCAATGC ACGATTGGCG GCATGACCGG CAACAACTCG TGCGGTTCAC GCTCGATCCA GTACGGCAAC ATGGTGCACA ACGTGCTCGG CGTCCAGGCC ATCCTGGCCA GCGGCGAGGA CGTGCGCTTC GATGCCAGTT GGCCGGCCGA GTCTGCGCCA CACCGGGCCA TTGCCGACGG CGTGCGCCGC ATCGCCACGC GCGAGCGCGA CGCCATCGCG CAGATGTATC CAACCGTGCT GCGCCGCGTG GGCGGCTACA ACCTTGATAT CTTCGCGCCG CGCAGTGAAC GGCCCTATAC CGCCGACGGC AGCGTCAATC TGGCGCATCT GCTCGTGGGA TCGGAAGGCA CCCTCGCCTA CTTCCGCCAC ATCACGCTGC AACTCGCGCC ACTACCGGCA CACAAGACCC TGGGTGTGGT GAATTTCCCG ACGTTCTATC AGTCGATGGA TCTCACGCGC CATATCGTGG CGCTGAAGCC GGCGGCCGTG GAACTGGTCG ATCGCACCAT GATCGACCTG GCCCGCAACA ATCCCGCATT CCGCCCCGTG ATCGACCGCG CGCTGGTGGG CGAGCCGGAA GCGATTCTGC TGGTTGAGTT CGCCGGCGAG GATCGCGCGG CCACGCTGCA GGGACTGGCC CGACTGGTCG AGCTGATGGC CGATCTTGGC CTGCCGGGCT CGGTAGTGGA AATGCCGGAG CCTGGTCCGC AGAAGGCGCT GTGGGAAGTG CGCAAGGCCG GCCTCAACAT CATGATGAGC ATGAAGGGCG ACGGCAAGCC GGTATCGTTC ATCGAAGACT GCGCCGTGCC GCTCGAGCAT CTGGCCGCGT ACACGTCCCG GCTGACAGAG GTGTTTCACA AGCACGGCAC GCGCGGCACC TGGTACGCCC ATGCCAGCGT CGGCACACTG CACGTGCGGC CAATCCTCGA CATGCGGCGC GACGGCGCGG CCAAGATGCG CGCCATCGCC GAGGAAGCCG CCGCGATGGT GCGCGAGTAC AAGGGCGCTT ACTCGGGCGA GCACGGGGAC GGCATCTGCC GCGGCGAATG GGTGGCCTGG CAGTTCGGCC CATCGCTGGC GCGCGCGTTC GAGGAGGTCA AGGCACTATT CGACCCCGAG AACCGCTGCA ATCCCGGCAA GATCGTGCGC ACGCCAAAGA TGGATGACAC ATCGCTGTTC CGTTTCCCAC CGAGCTACTC GGTCAAGCCG ATTCGGCCGG CGCTCGACTG GTCGGCATGG AACGTCACGC GGGACCCGGT CACCGAGGCC GAGAGCGCGC CGGGCACCGG CACCGATCCG GCAAACGGGC TGGCTGCAGC GGTGGAGATG TGCAACAACA ACGGCCATTG CCGCAAGTTC GACGCCGGCA CCATGTGCCC GAGTTACCGC GTCACACGTG ACGAGCAGCA CCTGACGCGT GGCCGCGCCA ACACGTTGCG GCTCGCCCTG TCCGGTCAGC TTGGCACCGA GGGACTGCTC GACGTCGCGG TCAGGGACAC GATGGACCTG TGTGTCTCCT GCAAGGGATG CAAGCGCGAC TGCCCGACCG GCATCGACAT GGCGAAGATG AAGATCGAGG TGCGCGCCGC CAACGCCAGC GCGGGCCGGC TGCGCGCGCG TGACAGGCTC GTGGCCTTCC TGCCGCGCTA CGCGGGCACC GCCAGCCGGC TGCGCTGGTT GTTCAACCTG CGCGACCGCG TGCCCGGCCT GCCGCAACTG ACTGAACGCC TGCTCGGCCT GTCGGCCAGA CGCTCGCTGC CCCGCTGGCA ATCGGCGTTC CTGCGCGATG ACTACGTGTC CCGGCCCGTC GGCGGCAAGG AAGTCGTGCT GTTCGTCGAT ACGTTCAACA ATCACATGGA ACCGGAGAAC GCGCGCGCGG CGCAACGCGT GCTCGAAGCG GCCGGATACA CCGTGCATCT GTCCGGGGTT CCGGGCGAGC GGCCTTTGTG CTGCGGCCGC ACGTTCCTGG CGGCCGGGCT GGTCGATGAA GCCAGGGCCG AAGCCCGGCG CGCGCTCGAT ACGCTATTGC CGTTCGTCTC GCGCGGCGTG GCCGTGGTGG GCCTGGAACC GTCCTGCCTG CTCTCCATGC GCGACGAATT CCTGCAGTAC GGCTATGGCG ACGCGGCGCG GCTGCTGGCG AACAATGCGT TCCTGTTCGA GGAGTTCCTG GTGCGCGAAC ATGCGGCCGG TCGATTTGCT CCCACGCTGA AGCCTATCGG CAGCACCGAG GCCCTGCTAC ATGGACACTG CCACCAGAAG GCGTTCGATG CCGTGCGGCC GGTGGAGCAG GTACTCGGCT GGATTCCGGA ACTCAAGACC TCGCTGATCG AATCGTCATG CTGTGGCATG GCGGGCAACT TCGGATACGA GGCCGAGCAC CACGAGGTGT CGATGAAGAT GGGGGAGCTT GCATTGCTGC CGGCGGTGCG CGGCGCCGAT GCGCGGACGC TGGTGGTCGC CGATGGCACA AGCTGCCGCC ATCAGATCCA TGACGGCGCC GACAGGCAGG CGCTGCACGT GGCACGGGTG CTGGAGATGG CACTTGGGGC GTGA
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Protein sequence | MALPTTPTPP GVQPLRFMPG AAAPALQSPL YRRLAAELRG EVLFDNASRG RYATDASIYQ VMPIGVVVPR DEADARLALD IARDFKAPLL PRGGGTSQCG QTVGEALVID NSKYLNQIID FDPVARTVTV QPGIVLDHLN AWLKPHGLWF PVDVSTAAQC TIGGMTGNNS CGSRSIQYGN MVHNVLGVQA ILASGEDVRF DASWPAESAP HRAIADGVRR IATRERDAIA QMYPTVLRRV GGYNLDIFAP RSERPYTADG SVNLAHLLVG SEGTLAYFRH ITLQLAPLPA HKTLGVVNFP TFYQSMDLTR HIVALKPAAV ELVDRTMIDL ARNNPAFRPV IDRALVGEPE AILLVEFAGE DRAATLQGLA RLVELMADLG LPGSVVEMPE PGPQKALWEV RKAGLNIMMS MKGDGKPVSF IEDCAVPLEH LAAYTSRLTE VFHKHGTRGT WYAHASVGTL HVRPILDMRR DGAAKMRAIA EEAAAMVREY KGAYSGEHGD GICRGEWVAW QFGPSLARAF EEVKALFDPE NRCNPGKIVR TPKMDDTSLF RFPPSYSVKP IRPALDWSAW NVTRDPVTEA ESAPGTGTDP ANGLAAAVEM CNNNGHCRKF DAGTMCPSYR VTRDEQHLTR GRANTLRLAL SGQLGTEGLL DVAVRDTMDL CVSCKGCKRD CPTGIDMAKM KIEVRAANAS AGRLRARDRL VAFLPRYAGT ASRLRWLFNL RDRVPGLPQL TERLLGLSAR RSLPRWQSAF LRDDYVSRPV GGKEVVLFVD TFNNHMEPEN ARAAQRVLEA AGYTVHLSGV PGERPLCCGR TFLAAGLVDE ARAEARRALD TLLPFVSRGV AVVGLEPSCL LSMRDEFLQY GYGDAARLLA NNAFLFEEFL VREHAAGRFA PTLKPIGSTE ALLHGHCHQK AFDAVRPVEQ VLGWIPELKT SLIESSCCGM AGNFGYEAEH HEVSMKMGEL ALLPAVRGAD ARTLVVADGT SCRHQIHDGA DRQALHVARV LEMALGA
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