Gene Rmet_5632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5632 
Symbol 
ID4042496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2388348 
End bp2391371 
Gene Length3024 bp 
Protein Length1007 aa 
Translation table11 
GC content67% 
IMG OID637981051 
ProductD-lactate dehydrogenase 
Protein accessionYP_587760 
Protein GI94314551 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTGC CAACCACCCC CACGCCACCC GGCGTGCAAC CGCTGCGCTT CATGCCCGGC 
GCGGCGGCAC CCGCCCTGCA ATCGCCGCTG TACCGGCGCC TGGCCGCCGA ACTGCGCGGC
GAAGTGTTGT TCGATAACGC CAGCCGTGGC CGCTATGCCA CCGATGCGTC GATCTACCAG
GTCATGCCGA TCGGCGTGGT GGTACCGCGC GACGAAGCCG ATGCGCGGCT GGCGCTGGAC
ATCGCCCGGG ACTTCAAGGC GCCGCTGCTG CCGCGCGGCG GCGGCACCAG CCAGTGCGGG
CAGACCGTGG GCGAGGCGCT GGTCATCGAC AACAGCAAGT ACCTGAACCA GATCATCGAC
TTCGATCCGG TGGCGCGCAC GGTGACCGTG CAGCCCGGCA TCGTGCTCGA CCACCTGAAC
GCATGGCTCA AGCCCCACGG CCTCTGGTTC CCGGTCGATG TATCGACCGC CGCGCAATGC
ACGATTGGCG GCATGACCGG CAACAACTCG TGCGGTTCAC GCTCGATCCA GTACGGCAAC
ATGGTGCACA ACGTGCTCGG CGTCCAGGCC ATCCTGGCCA GCGGCGAGGA CGTGCGCTTC
GATGCCAGTT GGCCGGCCGA GTCTGCGCCA CACCGGGCCA TTGCCGACGG CGTGCGCCGC
ATCGCCACGC GCGAGCGCGA CGCCATCGCG CAGATGTATC CAACCGTGCT GCGCCGCGTG
GGCGGCTACA ACCTTGATAT CTTCGCGCCG CGCAGTGAAC GGCCCTATAC CGCCGACGGC
AGCGTCAATC TGGCGCATCT GCTCGTGGGA TCGGAAGGCA CCCTCGCCTA CTTCCGCCAC
ATCACGCTGC AACTCGCGCC ACTACCGGCA CACAAGACCC TGGGTGTGGT GAATTTCCCG
ACGTTCTATC AGTCGATGGA TCTCACGCGC CATATCGTGG CGCTGAAGCC GGCGGCCGTG
GAACTGGTCG ATCGCACCAT GATCGACCTG GCCCGCAACA ATCCCGCATT CCGCCCCGTG
ATCGACCGCG CGCTGGTGGG CGAGCCGGAA GCGATTCTGC TGGTTGAGTT CGCCGGCGAG
GATCGCGCGG CCACGCTGCA GGGACTGGCC CGACTGGTCG AGCTGATGGC CGATCTTGGC
CTGCCGGGCT CGGTAGTGGA AATGCCGGAG CCTGGTCCGC AGAAGGCGCT GTGGGAAGTG
CGCAAGGCCG GCCTCAACAT CATGATGAGC ATGAAGGGCG ACGGCAAGCC GGTATCGTTC
ATCGAAGACT GCGCCGTGCC GCTCGAGCAT CTGGCCGCGT ACACGTCCCG GCTGACAGAG
GTGTTTCACA AGCACGGCAC GCGCGGCACC TGGTACGCCC ATGCCAGCGT CGGCACACTG
CACGTGCGGC CAATCCTCGA CATGCGGCGC GACGGCGCGG CCAAGATGCG CGCCATCGCC
GAGGAAGCCG CCGCGATGGT GCGCGAGTAC AAGGGCGCTT ACTCGGGCGA GCACGGGGAC
GGCATCTGCC GCGGCGAATG GGTGGCCTGG CAGTTCGGCC CATCGCTGGC GCGCGCGTTC
GAGGAGGTCA AGGCACTATT CGACCCCGAG AACCGCTGCA ATCCCGGCAA GATCGTGCGC
ACGCCAAAGA TGGATGACAC ATCGCTGTTC CGTTTCCCAC CGAGCTACTC GGTCAAGCCG
ATTCGGCCGG CGCTCGACTG GTCGGCATGG AACGTCACGC GGGACCCGGT CACCGAGGCC
GAGAGCGCGC CGGGCACCGG CACCGATCCG GCAAACGGGC TGGCTGCAGC GGTGGAGATG
TGCAACAACA ACGGCCATTG CCGCAAGTTC GACGCCGGCA CCATGTGCCC GAGTTACCGC
GTCACACGTG ACGAGCAGCA CCTGACGCGT GGCCGCGCCA ACACGTTGCG GCTCGCCCTG
TCCGGTCAGC TTGGCACCGA GGGACTGCTC GACGTCGCGG TCAGGGACAC GATGGACCTG
TGTGTCTCCT GCAAGGGATG CAAGCGCGAC TGCCCGACCG GCATCGACAT GGCGAAGATG
AAGATCGAGG TGCGCGCCGC CAACGCCAGC GCGGGCCGGC TGCGCGCGCG TGACAGGCTC
GTGGCCTTCC TGCCGCGCTA CGCGGGCACC GCCAGCCGGC TGCGCTGGTT GTTCAACCTG
CGCGACCGCG TGCCCGGCCT GCCGCAACTG ACTGAACGCC TGCTCGGCCT GTCGGCCAGA
CGCTCGCTGC CCCGCTGGCA ATCGGCGTTC CTGCGCGATG ACTACGTGTC CCGGCCCGTC
GGCGGCAAGG AAGTCGTGCT GTTCGTCGAT ACGTTCAACA ATCACATGGA ACCGGAGAAC
GCGCGCGCGG CGCAACGCGT GCTCGAAGCG GCCGGATACA CCGTGCATCT GTCCGGGGTT
CCGGGCGAGC GGCCTTTGTG CTGCGGCCGC ACGTTCCTGG CGGCCGGGCT GGTCGATGAA
GCCAGGGCCG AAGCCCGGCG CGCGCTCGAT ACGCTATTGC CGTTCGTCTC GCGCGGCGTG
GCCGTGGTGG GCCTGGAACC GTCCTGCCTG CTCTCCATGC GCGACGAATT CCTGCAGTAC
GGCTATGGCG ACGCGGCGCG GCTGCTGGCG AACAATGCGT TCCTGTTCGA GGAGTTCCTG
GTGCGCGAAC ATGCGGCCGG TCGATTTGCT CCCACGCTGA AGCCTATCGG CAGCACCGAG
GCCCTGCTAC ATGGACACTG CCACCAGAAG GCGTTCGATG CCGTGCGGCC GGTGGAGCAG
GTACTCGGCT GGATTCCGGA ACTCAAGACC TCGCTGATCG AATCGTCATG CTGTGGCATG
GCGGGCAACT TCGGATACGA GGCCGAGCAC CACGAGGTGT CGATGAAGAT GGGGGAGCTT
GCATTGCTGC CGGCGGTGCG CGGCGCCGAT GCGCGGACGC TGGTGGTCGC CGATGGCACA
AGCTGCCGCC ATCAGATCCA TGACGGCGCC GACAGGCAGG CGCTGCACGT GGCACGGGTG
CTGGAGATGG CACTTGGGGC GTGA
 
Protein sequence
MALPTTPTPP GVQPLRFMPG AAAPALQSPL YRRLAAELRG EVLFDNASRG RYATDASIYQ 
VMPIGVVVPR DEADARLALD IARDFKAPLL PRGGGTSQCG QTVGEALVID NSKYLNQIID
FDPVARTVTV QPGIVLDHLN AWLKPHGLWF PVDVSTAAQC TIGGMTGNNS CGSRSIQYGN
MVHNVLGVQA ILASGEDVRF DASWPAESAP HRAIADGVRR IATRERDAIA QMYPTVLRRV
GGYNLDIFAP RSERPYTADG SVNLAHLLVG SEGTLAYFRH ITLQLAPLPA HKTLGVVNFP
TFYQSMDLTR HIVALKPAAV ELVDRTMIDL ARNNPAFRPV IDRALVGEPE AILLVEFAGE
DRAATLQGLA RLVELMADLG LPGSVVEMPE PGPQKALWEV RKAGLNIMMS MKGDGKPVSF
IEDCAVPLEH LAAYTSRLTE VFHKHGTRGT WYAHASVGTL HVRPILDMRR DGAAKMRAIA
EEAAAMVREY KGAYSGEHGD GICRGEWVAW QFGPSLARAF EEVKALFDPE NRCNPGKIVR
TPKMDDTSLF RFPPSYSVKP IRPALDWSAW NVTRDPVTEA ESAPGTGTDP ANGLAAAVEM
CNNNGHCRKF DAGTMCPSYR VTRDEQHLTR GRANTLRLAL SGQLGTEGLL DVAVRDTMDL
CVSCKGCKRD CPTGIDMAKM KIEVRAANAS AGRLRARDRL VAFLPRYAGT ASRLRWLFNL
RDRVPGLPQL TERLLGLSAR RSLPRWQSAF LRDDYVSRPV GGKEVVLFVD TFNNHMEPEN
ARAAQRVLEA AGYTVHLSGV PGERPLCCGR TFLAAGLVDE ARAEARRALD TLLPFVSRGV
AVVGLEPSCL LSMRDEFLQY GYGDAARLLA NNAFLFEEFL VREHAAGRFA PTLKPIGSTE
ALLHGHCHQK AFDAVRPVEQ VLGWIPELKT SLIESSCCGM AGNFGYEAEH HEVSMKMGEL
ALLPAVRGAD ARTLVVADGT SCRHQIHDGA DRQALHVARV LEMALGA