| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5627 |
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| Symbol | tctA |
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| ID | 4042491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2382892 |
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| End bp | 2384418 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981046 |
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| Product | tricarboxylate transport protein (TctA) |
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| Protein accession | YP_587755 |
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| Protein GI | 94314546 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0245667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAC TCAATGCGTT GATGGGCGGC TTTGCCGTGG CGATGTCATG GCACAACGTC
GGACTGATGC TGGTGGGCAT CCTGCTCGGC ATCGTCGTGG GCGTGCTGCC CGGTCTGGGT
GGCCCCAACG GCGTGGCGAT CCTGCTGCCG CTGACGTTTT CGATGGAGCC GACGTCGGCC
ATCATCATGC TGTCGTGCAT CTACTGGGGC GCGCTGTTCG GTGGCGCGAT CACGTCGATC
CTGTTCAATA TTCCCGGCGA GGCGTGGTCC GTGGCCACCA CGTTCGACGG CTACCCGCTT
GCGCAGCAGG GTGAGGCGGG ACGCGCGCTG ACGTCGGCCT TCACTGGGTC GTTTCTCGGC
GCGCTGGCCG GTGTGCTGCT GATCACGTTC CTGGCGCCGC TGGTGGCGAA GTTCGCGTTG
CGCTTCGGGC CGCCGGAATT CTTCGCGGTG TACTTTCTGA CGTTCTGCAG CTTCGTCGGC
ATGGGAAAGG AAGCCAAGGC CAAGATCGTG ATCGCGATGT GCATCGGGTT CGCGCTGGCG
GCGGTCGGCA TGGATACGGT TTCCGGCACG CTGCGCATGA CGTTCGGCTC CACCGAACTG
CTGCGCGGGT TCGACTTCCT GGTGGCTGTT ATCGGCCTGT TCGGCATCAG CGAAATCCTG
ATGACGATGG AGGAGGGCGT AGCCTTCCGT GGCAAGCGGG CCAGTATCGA CCTCAAGGTG
GTGCTGAAGA CCTGGGCCGA ACTGCCGCGT TACTGGATGA CGCTGATCCG TTCGTCGATC
ATCGGTTGCT GGCTTGGCGT GACGCCGGGC GGCGCGACGG CCGCATCGTT CATGGGCTAC
GGCGTGGCCA AGCGTTTCTC ACGCAAGCGT GAGACGTTCG GGCGCGGCAA CGTCGAAGGC
GTGATCGCGC CGGAGTGCGC CGCGCACGCG GCCGGCACCA GCGCGTTGCT GCCAATGCTG
GCGCTTGGCA TTCCGGGGTC AGCCACGGCG GCGGTGCTGC TGGGTGGCCT GATGATCTGG
GGGCTGCAGC CGGGGCCGTT GCTGTTCACC GAGCAGAAGA CCTTCGTCTG GGGGCTGATC
GCGAGCATGT ACCTGGGCAA TCTGGCGGGC CTGATCGTGG TGCTTTCCAC GGTGCCGCTG
TTTGCCGCCA TCCTGCGCAT TCCGTTTGCG ATCATCGCGC CGCTGATCCT TGTGGTCTGC
GCGATCGGCG CGTTCACCGT GCATAACGCG ATGTTCGACG TCTGGCTCAT GCTGATCTTC
GGCGTGATCG GGTATGTGCT CAAGAAGCTT GAGTATCCGC TGGCGCCGCT GGTGCTGGCA
TTGGTACTGG GCGATCGCGC CGAGGATGCA TTCCGGCAGA CCATGCTGAT GTCGCAGGGC
GAACTCAACG TGTTCTGGTC CAACGGGCTC GTCGGCACGA TCATGGCGCT GGCGGTGGTG
ATCCTGGTCT GGCCGATGTT TGGCAGCCTG CTGGAGAAGA CCCGGCGCCG CAAGGTCGTG
TCGGCCCATC AGGGAGCGTC CGAATGA
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| Protein sequence | MEELNALMGG FAVAMSWHNV GLMLVGILLG IVVGVLPGLG GPNGVAILLP LTFSMEPTSA
IIMLSCIYWG ALFGGAITSI LFNIPGEAWS VATTFDGYPL AQQGEAGRAL TSAFTGSFLG
ALAGVLLITF LAPLVAKFAL RFGPPEFFAV YFLTFCSFVG MGKEAKAKIV IAMCIGFALA
AVGMDTVSGT LRMTFGSTEL LRGFDFLVAV IGLFGISEIL MTMEEGVAFR GKRASIDLKV
VLKTWAELPR YWMTLIRSSI IGCWLGVTPG GATAASFMGY GVAKRFSRKR ETFGRGNVEG
VIAPECAAHA AGTSALLPML ALGIPGSATA AVLLGGLMIW GLQPGPLLFT EQKTFVWGLI
ASMYLGNLAG LIVVLSTVPL FAAILRIPFA IIAPLILVVC AIGAFTVHNA MFDVWLMLIF
GVIGYVLKKL EYPLAPLVLA LVLGDRAEDA FRQTMLMSQG ELNVFWSNGL VGTIMALAVV
ILVWPMFGSL LEKTRRRKVV SAHQGASE
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