| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5625 |
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| Symbol | |
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| ID | 4042489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2380835 |
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| End bp | 2382082 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981044 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_587753 |
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| Protein GI | 94314544 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.344287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CCCCTGCAAT CGCGCCGGGT GCGTTGTCCG GCCTGCGTGT GCTGGAACTC
GCGCAGATCA TGGCCGGGCC CACCTGCGGC ATGATGCTGG CCGATCTCGG CGCCGACGTG
ATCAAGATCG AGAAGATCGA TGGTGGCGAC GACGCGCGTG GCTATCGCGA GCCGACCATC
AACGGCGTGT CGGCGCCGTT CCTGATGCTG AACCGCAACA AGCGCGGCAT CGCCCTTGAC
CTGAAGACAC CCGAAGGCCG CGAGGTGTTC CTGCGCATGG TGCGCAACGC CGACGTGGTG
ATTGAGAACT TCCGCAAGGG CACGCTGGAG AAGCTCGGGC TTGGCTACGA CACGCTGTCG
CGCGAGAACC CGGGCCTGAT TTATTGCGCG ATCTCGGGCT ATGGCCGCAC CGGGCCGTTC
GCCGACAAGG GCGGCTTCGA TCTGATCGCG CAGGGTTACA CGGGGCTTAT GAGCATTACG
GGCGAGGAGG GCGGGCCGCC GCTGCGCACC GGGAATTCCA TCGCCGATAT CAATGCGGGC
ATCCTGGCGG CGTTCGGCAT TCTTGCCGCG TATCAGCATC GGCAGAAGAC CGGGCGCGGG
CAGATCGTGG AAACGTCGCT GATCGAGGCC GGCCTGCAGC AGCTCTACTG GCACGCGGCG
ATCCATTTCG CCACGGGCGA GTCGCCGGGG CCGAGCGGGT CGGCGCACGT GCTGGCCACG
CCATACCAGG CATTTCCGAC GCAGGACGGC CATATCATCG TTGGCGGCGC GAACGAGAAG
AACTGGGCGC GTATCGCACA GGTTCTCGGA CATCCGGAAT GGGTCGAAGA CCCACGTTTT
CGGCGCAACG CCGACCGGAT GCGTCATCGC GACACGTTGC TTCCGGAGAT GGCCGGCATC
CTGATGACGC GCCCGTCCGC TGACTGGCTG GCGGCATTCG ATGCAGCGGG CGTCCCGGCC
GGACCCGTGC ATTCGATTGG CGAGGCACTG AACCATCCGC AGACGCTGGC GCGTGGCATG
GTGGTACGGC AACAGCACGC GGAAGCCGGG CCGATCCGGA CGCTGGGGCT GCCGATACAG
CTATCGGAAA CGCCGGCGCA GTACCATCGC CCGTCACCGA GGCTGGGCGA ACATACGCGG
ACGTTGCTGG CGGAATGTGG TTATGGCGAG GCGGAGATCG AGGCGATGCT CGAAGCCGGC
GTGGTCACGG AGACGGCCGC ATCGGCGGCG ACCGTGACCG AGATATAG
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| Protein sequence | MSDSPAIAPG ALSGLRVLEL AQIMAGPTCG MMLADLGADV IKIEKIDGGD DARGYREPTI
NGVSAPFLML NRNKRGIALD LKTPEGREVF LRMVRNADVV IENFRKGTLE KLGLGYDTLS
RENPGLIYCA ISGYGRTGPF ADKGGFDLIA QGYTGLMSIT GEEGGPPLRT GNSIADINAG
ILAAFGILAA YQHRQKTGRG QIVETSLIEA GLQQLYWHAA IHFATGESPG PSGSAHVLAT
PYQAFPTQDG HIIVGGANEK NWARIAQVLG HPEWVEDPRF RRNADRMRHR DTLLPEMAGI
LMTRPSADWL AAFDAAGVPA GPVHSIGEAL NHPQTLARGM VVRQQHAEAG PIRTLGLPIQ
LSETPAQYHR PSPRLGEHTR TLLAECGYGE AEIEAMLEAG VVTETAASAA TVTEI
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