| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5624 |
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| Symbol | |
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| ID | 4042488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2380202 |
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| End bp | 2380819 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637981043 |
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| Product | Hemolysin III family protein, channel protein |
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| Protein accession | YP_587752 |
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| Protein GI | 94314543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCG GCGAACGGTT CAACGGATAT AGCCACCTGG CAGGAGCGGT GCTCTCGGCG
GCTGGCATGG CGGTGCTAGT CACTTCATCG GCACTCCACA GCGACGCCTG GAAGGTCGTC
AGCTCCGTCG TCTATGGCAC CACGCTGGTG CTGCTCTACA CGATCTCCAC CGTCTACCAC
AGCGTTCGCG GCCCCGCGAA GGACATCTTC CGCCGCCTCG ACTATTGCGC GATCTACCTG
CTGATCGCCG GCAGCTATAC CCCGTTCGCA TTGGTCACAT TACGTGGCCC CTGGGGCTGG
ACCCTGTTCG GCGTCAACTG GGGGCTGGCC GTGGCCGGCA TCATTCAGGA ACTCTGGATC
GGCCATCGCA CCCGCATCTT CTCGCTGGCC ATCTACGTGA TCATGGGCTG GCTGGTGCTG
ATCGCGTTCG GCCCGCTGGC GGCGGCCCTG CCGCCCGTGG GGCTGTACTG GCTCGTGGCC
GGCGGCGCCA TCTACACTGC CGGCATCGGC TTCTTCCTGT TCGACGAGAA GGTGCGCCAC
TTCCACGGCA TCTGGCACCT GTTCGTGCTG GGCGGCAGCA TGTGCCAGTT CATCAGCATC
CTGTTCTACG TCGGGTAA
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| Protein sequence | MYRGERFNGY SHLAGAVLSA AGMAVLVTSS ALHSDAWKVV SSVVYGTTLV LLYTISTVYH
SVRGPAKDIF RRLDYCAIYL LIAGSYTPFA LVTLRGPWGW TLFGVNWGLA VAGIIQELWI
GHRTRIFSLA IYVIMGWLVL IAFGPLAAAL PPVGLYWLVA GGAIYTAGIG FFLFDEKVRH
FHGIWHLFVL GGSMCQFISI LFYVG
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