Gene Rmet_5623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5623 
Symbol 
ID4042487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2379635 
End bp2380030 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID637981042 
Productpeptidylprolyl isomerase 
Protein accessionYP_587751 
Protein GI94314542 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.588755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TCTCCCTGAT CCTCGCCGCC GTGGCGCTGG GCGCCGCAGG TATCGCGCAG 
GCTGAAACGC TGCCGTCCGG CGTGGTGATC GAGCATGTGA CCAAGGGCAC CGGCGCTTCG
CCGAAAGCAA CGGATACGGT CAAGGTCCAC TACCGCGGCA CGCTGACCGA CGGCAAGGAG
TTCGACAGCT CCTACAAGCG CGGCCAGCCG ATCTCGTTCC CCCTGAACCG CGTGATCCCG
TGCTGGACCG AGGGCGTGCA GAAGATGCAG GTCGGCGGCA AGGCCAAGCT GACTTGCCCG
GCCTCCACGG CCTACGGCGA GCGCGGCGTG CCGGGCACGA TCCCGCCGAA CGCGACGCTG
AACTTTGAAG TGGAGCTGCT GGGGATTGGC GGCTGA
 
Protein sequence
MKKLSLILAA VALGAAGIAQ AETLPSGVVI EHVTKGTGAS PKATDTVKVH YRGTLTDGKE 
FDSSYKRGQP ISFPLNRVIP CWTEGVQKMQ VGGKAKLTCP ASTAYGERGV PGTIPPNATL
NFEVELLGIG G