Gene Rmet_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5618 
Symbol 
ID4042482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2374972 
End bp2376042 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID637981037 
Productfamily 2 glycosyl transferase 
Protein accessionYP_587746 
Protein GI94314537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCT GCCTGTCGAT GATCGTCAAG AACGAGGCCG CCGTGATCGA GCGCTGTCTG 
CGCGCGGTGC GCCCGCACAT TCACGCCTGG GCGATTTCGG ATACGGGGTC GACCGACGGG
ACACAGGACA TTATTCGCAA TACGCTCGGC GACCTGCCGG GTGAACTGAT CGAACGTCCA
TGGGTGGATT TCTCGACCAA CCGCAATGAA GCGCTCGCGC TGGCGGCCAA GCACGGTGAC
TATGCGTTGC TGATCGACGC CGACGACACC ATCGAGGCTT CGGAACTCGG CGAACTGACC
GCCGACTGCT ATGACCTGCT CGTCCAGTTT CGCTCGCTGA CCTACAGTCA GCCACATCTG
ATCCGGCTGG GCCACGGGTT CTTCTATACG GGCGTGACCC ACGAATACAT CGACTGCAAC
CGCCCGTATA GTCGCGACAC CTTGAAGAAC GCGATCTATC GCATTGGCGA CGACGGCGCA
CGGCGCGTGA GCGGCAGGAA GTTCGTGGAA GACGCAGGGA TACTGGAGAA GGCACTCGCA
GCCGATCCCG GCAATACGCG TTACCAGTTC TATCTCGCCC AGAGCTATCG TGATGGCGGT
CTGGTGGACA AGGCCATTGC CGCCTATGCG AACCGCGCCA CCATGGGCGG GTGGGATGAG
GAAGTCTATT ACTCGATGTT GCAGATGGCG GTGCTGAAGG AGGGCGGCGG AGCGTCGCCC
GGGGACATCG TCGAGGCCTA CCTCGAGGCC TACAACTACC GGCCGACACG GGCCGAAGCG
CCTTGCGAGC TCGCGCGCTA TTTCAGGCTG CGGCAGCGCC ATGTCCTGGC CCGCGACTTC
GCGCGTGTTG CCACCGGCAT CGCCCAGCCC GATGACCGGC TCTTCATGGA CCAGACCGTC
TATGACTGGC GCGCGCGTGA CGAGCTGTCG ATTGCGCTGT ACTGGTGCAA TGAACGCGAT
GAAAGCGCGC GGCTCTGCCG CGAACTGCTT GCCGATCCGC GCCTGCCGCG CGAGCAGCAC
GATCGCGTGA CGCGAAACCT CGCCTTTGCA ATCGGCGATG TCCCGGGCTG A
 
Protein sequence
MRICLSMIVK NEAAVIERCL RAVRPHIHAW AISDTGSTDG TQDIIRNTLG DLPGELIERP 
WVDFSTNRNE ALALAAKHGD YALLIDADDT IEASELGELT ADCYDLLVQF RSLTYSQPHL
IRLGHGFFYT GVTHEYIDCN RPYSRDTLKN AIYRIGDDGA RRVSGRKFVE DAGILEKALA
ADPGNTRYQF YLAQSYRDGG LVDKAIAAYA NRATMGGWDE EVYYSMLQMA VLKEGGGASP
GDIVEAYLEA YNYRPTRAEA PCELARYFRL RQRHVLARDF ARVATGIAQP DDRLFMDQTV
YDWRARDELS IALYWCNERD ESARLCRELL ADPRLPREQH DRVTRNLAFA IGDVPG