Gene Rmet_5611 details

Gene Information

• Locus tag: Rmet_5611
• Symbol: cyoD
• ID: 4042475
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007974
• Strand: +
• Start bp: 2367704
• End bp: 2368132
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637981030
• Product: cytochrome o ubiquinol oxidase subunit IV
• Protein accession: YP_587739
• Protein GI: 94314530
• COG category: [C] Energy production and conversion
• COG ID: [COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4
• TIGRFAM ID: [TIGR02847] cytochrome o ubiquinol oxidase subunit IV

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCGC AAGACCACGC GATGGACGGC CACGGGCATG GCCATGAGCA CGAAGAGGAA 
GTGGGGCCGC ACGCCACGCT GGGTGGCTAT CTGACGGGCT TCGTGCTGTC GGTGTTCCTG 
ACAGCGGTGC CGTTCTGGCT GGTGATGGGC AAGGTGTTCG AAAAGTCGTC CACCACCGCC 
ATCGCCATCC TGCTGATCGG CGCGGTGCAA ATCGTGGTGC ACATGATCTA CTTCCTGCAC 
ATGAACGCCA AGTCGGAAGG CGGCTGGAAC ATGCTTTCCC TGATGTTCAC GCTGACACTG 
GTCGTGATCA CGCTGACCGG ATCGCTATGG GTGATGTTCC ACCTGAACAG CAACATGATG 
CCGCAGATGC GGCACACGCA GCAGGCGGCG GAATCGGGTG GCACGATCGT GCCACCCAGA 
ACCAAATAG 

 

Protein sequence

MSAQDHAMDG HGHGHEHEEE VGPHATLGGY LTGFVLSVFL TAVPFWLVMG KVFEKSSTTA 
IAILLIGAVQ IVVHMIYFLH MNAKSEGGWN MLSLMFTLTL VVITLTGSLW VMFHLNSNMM 
PQMRHTQQAA ESGGTIVPPR TK