| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5609 |
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| Symbol | cyoB |
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| ID | 4042473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2365055 |
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| End bp | 2367058 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637981028 |
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| Product | cytochrome o ubiquinol oxidase subunit I |
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| Protein accession | YP_587737 |
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| Protein GI | 94314528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC GCTCCGAACT CGCCAACCTG ATTTTCGGCC GACTGTCATG GGAGGCCATT
CCCTACCATG AGCCGATCCT GATCGCCACC TTCGCCGCCG TGGCGATAGG CGGACTGGCA
CTGGTGGCGC TGCTGACGTA CTTCCGCGCG TGGGGCTATC TCTGGCGAGA GTGGTTCACC
AGCATCGACC ACAAGAAGAT CGGCATCATG TACATCGTGC TGGGCATCGT GATGCTGCTG
CGTGGCTTTG CCGATGCGGT CATGATGCGG ATGCAGCAGG CCGTCGCGTT CGGCGACAAC
GCCGGGTTTC TGCCACCTCA CCACTACGAC CAGATCTTCA CCGCGCACGG CGTGATCATG
ATCTTCTTCG TGGCCATGCC GCTGGTCACC GGGCTGATGA ACTTTGTCAT GCCGTTGCAG
ATCGGCGCGC GCGACGTGGC ATTCCCGTTC CTCAACAACT TCAGCTTCTG GATGACCACG
GGCGGCGCGA TTCTGGTCAT GATGTCGCTG TTCGTAGGCG AATTCGCGCG CACCGGCTGG
CTGGCCTATC CTCCGCTTTC GGGCATCCTC CACAGTCCCG ACGTTGGCGT GGATTACTAC
ATATGGGCGC TACAGATAGC GGGGGTGGGG ACGCTGTTAT CAGGGATCAA CCTGCTGGTC
ACCATCGTCA AGATGCGCGC CCCTGGCATG ACGCTAATGC GGATGCCGAT CTTCACGTGG
ACGTCGCTGT GCACGAACGT GCTGATCATC GCCGCCTTCC CGGTACTGAC CGCCGCGCTG
GCGCTGCTGG CGCTGGATCG CTACGCCGGC ACGAACTTCT TCACAGCCGA CCAGGGCGGC
AGCGCGATGA TGTACGTGAA CCTGATCTGG ATCTGGGGTC ACCCCGAGGT CTACATCCTG
GTATTGCCGG TGTTCGGTGT GTTCTCGGAA GTGGTGGCCA CGTTCGCGCG CAAGCGCCTG
TTCGGCTACG CGTCGATGGT CTATGCGACG GTGGTGATCA CCGTGCTCTC CTACCTGGTC
TGGCTGCACC ACTTCTTCAC GATGGGCTCC GGCGCCAGCG TCAATTCGTT CTTCGGGATC
ACGACGATGA TCATCTCGAT CCCGACCGGC GCCAAGATCT TCAACTGGCT GTTCACGATG
TACCACGGCA AGATCCGCTT CGAGCCACCG ATGCTGTGGA CGGTCGGCTT TATGGTCACG
TTCGTGATCG GCGGCATGAC CGGCGTGCTG CTGGCAGTGC CTCCGGCGGA CTTCTCGCTA
CACAACAGCC TGTTCCTGAT CGCCCACTTC CATAACGTAA TCATCGGCGG CGTGCTGTTC
GGGCTGATGG CCGGCATCAC GTACTGGTTC CCCAAGGCAT TCGGCTATCG CCTGGTGTCG
TCGTGGGGCA AGGCGTCGTT CTGGTTCTGG TTCGTCGGCT TCTACTTCGC GTTCATGCCG
CTGTACTGGC TCGGCCTGCT CGGCGTGACC CGCCGCATGA ACCATTTTGA CGATCCGTCG
CTGCAGATCT GGTTCCAGAT CGCCGCGTTC GGCGCGTTGC TGATCGCCAT CGGCATCGCC
TGCTTCCTGA TCCAGCTCGT GGTGAGCTTC ATGCGCCGCG AGGAACTCCG CGACACCACC
GGCGACCCCT GGGGCGGCCG CACGCTCGAA TGGTCGACCT CGTCGCCGCC GCCGCAGTAC
AACTTCGCAT TCACGCCGGT CGTGCACGAC ACCGATGCCT GGTGGCACAT GAAACACAAC
GGCTTCCAGC GGCCGCAGCA AGGCTTCATC CCGATCCACA TGCCGAAGGG CACGGCGGCC
GGCATCGTAC TGGCCGGGCT CTCCACGATA TGCGGCTTCG CGTTGATCTG GCACATCTGG
TGGTTGGTCA TCGCGTCGTT CGCGGCCACG ATCATTGCAG CGATCATCCA TACCTTCAAC
TACAAGCGCG ACTACTACAT TTCGGCAGAG CAGGTGGTCC GGACTGAAGC GGCGCGCACC
CAACTGATGG CCGGCCATGG TTGA
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| Protein sequence | MPERSELANL IFGRLSWEAI PYHEPILIAT FAAVAIGGLA LVALLTYFRA WGYLWREWFT
SIDHKKIGIM YIVLGIVMLL RGFADAVMMR MQQAVAFGDN AGFLPPHHYD QIFTAHGVIM
IFFVAMPLVT GLMNFVMPLQ IGARDVAFPF LNNFSFWMTT GGAILVMMSL FVGEFARTGW
LAYPPLSGIL HSPDVGVDYY IWALQIAGVG TLLSGINLLV TIVKMRAPGM TLMRMPIFTW
TSLCTNVLII AAFPVLTAAL ALLALDRYAG TNFFTADQGG SAMMYVNLIW IWGHPEVYIL
VLPVFGVFSE VVATFARKRL FGYASMVYAT VVITVLSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKIFNWLFTM YHGKIRFEPP MLWTVGFMVT FVIGGMTGVL LAVPPADFSL
HNSLFLIAHF HNVIIGGVLF GLMAGITYWF PKAFGYRLVS SWGKASFWFW FVGFYFAFMP
LYWLGLLGVT RRMNHFDDPS LQIWFQIAAF GALLIAIGIA CFLIQLVVSF MRREELRDTT
GDPWGGRTLE WSTSSPPPQY NFAFTPVVHD TDAWWHMKHN GFQRPQQGFI PIHMPKGTAA
GIVLAGLSTI CGFALIWHIW WLVIASFAAT IIAAIIHTFN YKRDYYISAE QVVRTEAART
QLMAGHG
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