| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5607 |
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| Symbol | |
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| ID | 4042471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2362455 |
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| End bp | 2363774 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637981026 |
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| Product | major facilitator protein family permease |
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| Protein accession | YP_587735 |
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| Protein GI | 94314526 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.361176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGTC TGTCCCACCA GCATCGCGCG TCGCCCACTG CACCTCCGGC TCCCGGTCAT
CATGACGTGG CGCCAGCCGA GATCGCTACA GGCGTGGTGA TCGGGCGCGC CTCCGAGTAC
TTCGACTTCT TCACGTATGG CATCGCCTCG GTGCTCGTCT TCCCATCGGT CTACTTCCCG
TTTGCGAGCG AGCTGGCCGG TCTGCTCTAC AGCTTCGCGA TCTTCTCCTT CGCATTCGTC
GGACGGCCGT TCGGGACGAC ACTGTTCATG CGAATCCAGC GACGCTGGGG CCGCGGCATC
AAGCTGACGG CCTCGCTGTT CCTGCTCGGC ACCGCCACGG TGGGTATCGC GTTCCTGCCG
TCATATGCGT CGATCGGCAG TTCGGCCATC TACCTGCTGG CGCTGTTCCG CTTCCTGCAG
GGCATTGCGT TTGGCGGTTC GTGGGATGGC CTGCCGTCGC TGCTGGCGCT CAATGCGCCG
GAAAACAAGC GCGGGTGGTA CGCGATGGTG GGGCAGCTTG GCGCGCCGAC TGGCTTCATC
GTGGCGGGTG CGTTGTTCCT GTTCCTGCGC TCGAGCCTGA CGCCGGAAGA GTTCATCGAT
TGGGGGTGGC GTTATCCGTT CTATGTGGCC TTCGCCATCA ACGTGGTGGC GCTGTTCGCG
CGGCTGCGCC TGGTGGTCAC GCATGAATAC ACCCGACTGC TCGAGGAGGA TGAACTCGAG
CCAATCAGCA CGCTGCAGAT GGTCAATGCG CAGGGCTTCA ACATCTTCCT CGGCGCCTTC
GCGGCACTGG CCAGCTATGC GCTGTTCCAC CTCGTCACCG TGTTTCCGCT GTCATGGGTG
AGCCTGCACA AGACGCAGAA CATCACAGAC GTGCTCGCGG TCCAGATCGT GGGTGCGGTC
ATTGCGTTCA TCGGCACGTT GATCTCAGGC TGGCTTGCCG ACCGCATCGG CCGGCGTACC
ACGCTGGCGA CAATGGCCGT CTTGATTGGC ATCTTTAGCC TGTTCAGTCC GTGGCTGCTC
GATGGCGGCG CGACCGGCCA GAACCTGTTC ATCCTGATCG GCTTCGGCCT GCTGGGTTTG
TCGTACGGGC AGGCGGCTGG CGTGGTGACG TCGAACTTCG AGACCCGCTA TCGCTATACG
GGCGCCGCGC TGACGACCGA TTTCGCGTGG CTGTTCGGCG CCGCATTTGC GCCACTGGTA
GCGCTGGGAC TGTCGTCGCT GTTCGGTCTG GTCGCGGTTA GTCTGTATCT GCTGTCTGGG
GTGGTGGGAA CGCTGGTGGC GCTGCGGATC AACCGTGCGC TGGGGACCCC CGACGATTGA
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| Protein sequence | MASLSHQHRA SPTAPPAPGH HDVAPAEIAT GVVIGRASEY FDFFTYGIAS VLVFPSVYFP
FASELAGLLY SFAIFSFAFV GRPFGTTLFM RIQRRWGRGI KLTASLFLLG TATVGIAFLP
SYASIGSSAI YLLALFRFLQ GIAFGGSWDG LPSLLALNAP ENKRGWYAMV GQLGAPTGFI
VAGALFLFLR SSLTPEEFID WGWRYPFYVA FAINVVALFA RLRLVVTHEY TRLLEEDELE
PISTLQMVNA QGFNIFLGAF AALASYALFH LVTVFPLSWV SLHKTQNITD VLAVQIVGAV
IAFIGTLISG WLADRIGRRT TLATMAVLIG IFSLFSPWLL DGGATGQNLF ILIGFGLLGL
SYGQAAGVVT SNFETRYRYT GAALTTDFAW LFGAAFAPLV ALGLSSLFGL VAVSLYLLSG
VVGTLVALRI NRALGTPDD
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