| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5603 |
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| Symbol | |
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| ID | 4042467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2357595 |
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| End bp | 2359364 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981022 |
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| Product | hypothetical protein |
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| Protein accession | YP_587731 |
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| Protein GI | 94314522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGT TCGCATTCGA TGTTGCTCTG GCACCGGAGC CTGCCGATCG CAGGCGGCCC
GATGCCGGCC CTGCCTACGG CGAGGCCCTG GCGTTGCTGG AGGCTTCCGG CGCGCTGGCC
ATGCGCGTGG ACATGCAGGG ACGCATTCTC GAAGCGACTG AAGCCACCGC CGAACTACTG
GTCTATCCGC GCGAATACCT GCTGCGCACC TCGATCCTCG ACATCATCGC GCTGGAGTCC
CGCGAACGCG TGGCCATGCT GCTGACGTGC TGCGCGCAGG ACCAGACCAT GCGCCGCGAG
CGCGTGCGCG TGGCCGGCGG TATCGGCGGG CCCAACTGGC TCGACCTGCG CGTGAGCTAC
CACCGCGATG CCGACGATGC GCCCAGCCTG CTGCTGTTCG GCCAAGACAT CACGCATTGG
GTGGAGTCGG AGCGAGACCT GACCGAGCGT GCCTTCCTGG ACCCGTTGAC CGGTGTCGGC
AACCGCGCCT ACATCGGCAA GCGGATCGAG GAATACACGT CCGGCCGCCG CGCGGGCCAG
CCGTTCGCGG TTGCCCTGAT GGATCTGGAC GGCTTCAAGA ACGTCAACGA CTCGCTCGGC
CACGAGTTTG GCGACGCGCT GCTCAAGGAA GTGGGCACAC GCCTGCAGGA CACTGTCCGC
ACGCGCCAAA GCGTGGCGCG GCTGGGTGGC GACGAGTTCG TGCTGATGCT CGATGACATG
GAGTCCGAGG CGGACGCCAT CCGCATCCTC GAGCGCGTGA TCCATGTCTG CCGCCAGCCC
TTCCTGCTGG GCGGCTGCCA GGTGCGCATC ACCACCAGCA TCGGCCTGGC CTTCTCGAAC
GGTTCGGCGC AATCGGAGTC GCAATGGCTG CGCCGTGCGG ACCTGGCGAT GTACGAGGCG
AAGGCGCTCG GCAAGAACCG TTACTGCATC TACTCGCCCG AACTCGACCG CCGCCTGGAC
GAACAGTTCC AGATCGAGCA GAGCATGTTC GAAGCGGTGC AGAACGGAGA ATTCCTGCTG
CACTACCAGC CGATCGTCTG GCCCGGAAGC GGTGAAGTCT GCGCCGTGGA AGCACTGATG
CGCTGGGAGC ACGCAGGCCG CGATATCCGG CCCGATGTGT TCATTCCCGT CGCCGAGAAG
AACGGTCTGA TCAAACACCT TGGCGCGTGG GCGCTGCGCT GCGCCTGCGC GCAGCTTGCC
GCCTGGGATG CGCTGGGTAT CCATGTAGGC CATATGTCGG TCAACGTGTC AGCCGTGCAG
TTCCTGCATC CGGGCTTCTT CGACAGCGTC CGCAATGCGA TCCAGGAATC GGGCATCGGC
GCCGACCGGC TACTGCTGGA AATCACCGAA AGCGCGCTGA TGACCGATCC GAAGGCCGCC
GAGGAACTGC TCCTTTCGCT GCGTGCGCTC GGCATCCGCT TCGCCGTCGA TGATTTCGGC
ACCGGCTATT CGAGCCTGTC GTACCTGCGC CGCTTTCCGC TGTCGGCCCT TAAGGTCGAC
CGCAGCTTCG TCGCCGACAT GGTCGATTCA CCGCACGCGC GGACCATCGT GTCGGCCGTG
CTGTCGCTGG CACGCGAACT CGGTCTCGTC GCCATTGCCG AGGGCGTGGA AACCGATGCC
CAAAACAAGC TGTTGGCCGC GCAGGGCTGC AACCTTGTGC AGGGATGGCG CTTTGCACGT
GCCGTCGCCG CCGCCGATTT CGAGAGCGCC GTCACCGACG GCAGGTTCGT GGTCGGCGAG
GGCGAAGTCT TCGCGCCACG GGTGTCCTGA
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| Protein sequence | MTAFAFDVAL APEPADRRRP DAGPAYGEAL ALLEASGALA MRVDMQGRIL EATEATAELL
VYPREYLLRT SILDIIALES RERVAMLLTC CAQDQTMRRE RVRVAGGIGG PNWLDLRVSY
HRDADDAPSL LLFGQDITHW VESERDLTER AFLDPLTGVG NRAYIGKRIE EYTSGRRAGQ
PFAVALMDLD GFKNVNDSLG HEFGDALLKE VGTRLQDTVR TRQSVARLGG DEFVLMLDDM
ESEADAIRIL ERVIHVCRQP FLLGGCQVRI TTSIGLAFSN GSAQSESQWL RRADLAMYEA
KALGKNRYCI YSPELDRRLD EQFQIEQSMF EAVQNGEFLL HYQPIVWPGS GEVCAVEALM
RWEHAGRDIR PDVFIPVAEK NGLIKHLGAW ALRCACAQLA AWDALGIHVG HMSVNVSAVQ
FLHPGFFDSV RNAIQESGIG ADRLLLEITE SALMTDPKAA EELLLSLRAL GIRFAVDDFG
TGYSSLSYLR RFPLSALKVD RSFVADMVDS PHARTIVSAV LSLARELGLV AIAEGVETDA
QNKLLAAQGC NLVQGWRFAR AVAAADFESA VTDGRFVVGE GEVFAPRVS
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