| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5592 |
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| Symbol | |
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| ID | 4042456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2346454 |
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| End bp | 2347599 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981011 |
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| Product | HlyD family multidrug resistance protein |
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| Protein accession | YP_587720 |
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| Protein GI | 94314511 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.306614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA CCCACTCCGC CGCAACGGCG TCGCCAGCCG GCGTCGCGCC AGAATCCGCC
GTTCCCGATC GCACTTCACG CCGCAAGCAG ATCCTGCTCG GCGCGGGTTT GCTGCTTCTC
GCGCTTGCCC TGGCGTACGG TGTGCGCTGG TGGCTCTATG GCCGCTTCAT CGAAAGCACC
GATGACGCCT ATATACAGGC CGATAGCGTG ACGGTGGCAC CCAAGGTCAA CGGCTACGTG
GCCGAGGTCT ACGTGCGTGA CAACCAGCAG ATCCAGGCGG GTCAGGAACT GGTGCGGCTC
GACAATCGTC AGTACCAGGC AGCCTATGAT GAGTCGCAGG CGACCGTGGC TTCGCGGCAG
GCCGACGTGA CGCGCGCGGA AGCCGATCTC GCGCAGCAGC AGGCGAGGAT CGCGCAGGCT
GCCGCGGAAG TGGATGGCGC GCGAGCCAAT TCGCGCTATG CGGCATCGCA GGTGGAACGC
TATGCGCCAC TGGTGAAATC GGGCGCCGAA ACGGAAGAGC GCACGGCCGA GCTGCGCAAT
GCGCAGACCC GCGCATCCAC CACGCTGGCT GCCAACGAGG CTGCCTTGCG GGTGGAACAA
AGCCAGACGG TGACGCTGAA GGCGCGGCTC GAGCAGGCGC ATGCGCAGCT CGACGTGGCC
CAGGCCAGCG CGCGTCAGGC AAAGCTCAAT CTCGATGACA CCGTGGTGCG ATCCACCACG
GCCGGGCGTG TTGCCGACAA GGGTGTGCGC GTCGGCCAGT TCGCCCAGCC CGGCATGCGT
CTGCTGACCG TGGTGCCGGT ACAGGACCTC TATCTGACCG CCAATTTCAA GGAAACGCAG
GTGGGCCGCA TGCGCCCAGG CCAGCCGGTG ACGCTCCACG TCGACGCACT ACCCGGTGAG
GAACTGCATG GTGTGGTCGA TAGCCTGTCG CCCGGTACCG GCTCGCAGTT TGCCCTGCTG
CCCGCACAGA ATGCCACGGG CAACTTCACC AAGATCGTCC AGCGCGTGCC GGTGCGGATT
CATGTGGACG TGCCGACGGA AGCGCGCGCG ATCCTGGTGC CGGGCCTGTC GGTAGTCGTC
GACATCGACA CGCGCGAGCT CCATCCCGCC AGGACCCAGG CCGACATCAA GGCCACCCAT
GGCTGA
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| Protein sequence | MSATHSAATA SPAGVAPESA VPDRTSRRKQ ILLGAGLLLL ALALAYGVRW WLYGRFIEST
DDAYIQADSV TVAPKVNGYV AEVYVRDNQQ IQAGQELVRL DNRQYQAAYD ESQATVASRQ
ADVTRAEADL AQQQARIAQA AAEVDGARAN SRYAASQVER YAPLVKSGAE TEERTAELRN
AQTRASTTLA ANEAALRVEQ SQTVTLKARL EQAHAQLDVA QASARQAKLN LDDTVVRSTT
AGRVADKGVR VGQFAQPGMR LLTVVPVQDL YLTANFKETQ VGRMRPGQPV TLHVDALPGE
ELHGVVDSLS PGTGSQFALL PAQNATGNFT KIVQRVPVRI HVDVPTEARA ILVPGLSVVV
DIDTRELHPA RTQADIKATH G
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