| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5590 |
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| Symbol | |
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| ID | 4042454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2343427 |
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| End bp | 2344884 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637981009 |
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| Product | NodT family outer membrane lipoprotein |
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| Protein accession | YP_587718 |
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| Protein GI | 94314509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT CCTTTCGTGC CACCTTGCTG ACGCTTGCGG CGGCGATGTT CGCCGCGGGC
TGCACCGTTG GCCCCGACTA TCGCGGCGCG CCGCAGGTGG CTGGCAACGC GATCGACACC
GGAAAATTTC CCCGCGCCGG GGAAGGCACC GACAGCCAGA CGCCACGTGT AGCCGACTGG
TGGCACGCGC TGGGCGACAC GCAACTCGAT GGACTGATCG AATCGGCGTT GAAGCAAAGC
CCCGATATCC GCGTGGCGCG CGCGCGCGTG CGACAGGCAC GTGCCGGACT GGCCGGAAAC
AAGGCCAACC TGTTCCCGAC GGTTGCCGTC GATGCGGCCA CGTTGCGCAC GCGCTCGCCG
AACCTGTCCG CGCTGTCGGG CCAGGGCTCG TCGAATGCCG GGCGCGGGCC GTTGTCGCTC
TATATCGCAG CCTTCGACGC AAGCTGGGAG ATCGACCTGT TCGGTGGCAC GCGTCGTTCG
ATCGAAGCTG CGTCGGCCGA AGCCGATGCC GCCGATGCGC AACTGGCCGA TGCCCACGTG
CAATTGGCTG CCGAAGTGGC ACAGGCCTAC ATCACACTGC GCGAGCAGCA GGAAAGCCTT
GCGCACCTGA CGTCGTCCGA GCAACTCGAA GCGGAGATGT TCGAGCTGAC GCAGCAGCGT
CGCGCACGCG GCGTGGCATC GCAGCTTGAG GTGGAGCGGC TGATGACGCA ACTCGACAAC
ACGCGCGCGC AGATGTCGCC GGTGCAAGCC AGCATCGCCG AATCGCTGGA CCAGCTTGCG
ATGCTGACTG GCCGCTCGCC GGGGACGCTC GACGCGGAGC TATCGGCGCC GAAGCCGTTG
CCCGGCGTGC CGGAAACCGT CGCCGTTGGC GATCCGGGCG CGCTGCTGAA ATCACGTCCC
GATATCCGTG CCGCCGAACG GCGTCTGGCA TCGAGCACGG CGCAGATCGG CGTGCGCAAG
GCGGACTGGT TTCCGAAGCT GTCGCTGCTC GGCTCGCTGG GCTTCGCGGC GACGGACCCC
AGTCACCTCG CGCGCAAGGA AAATGGCACG TGGATGACGC TGCCGCGCCT GCAATGGAAT
ATCCTCGATT TCGGCCGTGT GGCCGCAGGA GTCGAGGGCG CCGAGGGCGG GCGCGACGAA
GCGGAGGCCA GCTACGAGAG CGTGGTGCTG AAGGCACTGC GCGATGCCGA TGTCGCATTG
TCGCGCTACG GCCATCAGCG CGAGCACGTG GTTGTGCTGC GTCGCGTGGA AGCATCCGCG
GAACGCGCCT CGACGTTGCA GCAGCAGCGC TACCGCGCCG GCACGGCAAG CATGCTCGAA
TGGCTCGATG TCGAACGCAC GCGAGTGGTG GCCCAACAGA GCCGCATCTC GGGCGATGCG
GATCTGCTCA AGGATTTCGT CTCGCTGCAG AAGTCGCTGG GCCTCGGCTG GCAATCTTCC
GCGGCGCCAG CCTCCTGA
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| Protein sequence | MSVSFRATLL TLAAAMFAAG CTVGPDYRGA PQVAGNAIDT GKFPRAGEGT DSQTPRVADW
WHALGDTQLD GLIESALKQS PDIRVARARV RQARAGLAGN KANLFPTVAV DAATLRTRSP
NLSALSGQGS SNAGRGPLSL YIAAFDASWE IDLFGGTRRS IEAASAEADA ADAQLADAHV
QLAAEVAQAY ITLREQQESL AHLTSSEQLE AEMFELTQQR RARGVASQLE VERLMTQLDN
TRAQMSPVQA SIAESLDQLA MLTGRSPGTL DAELSAPKPL PGVPETVAVG DPGALLKSRP
DIRAAERRLA SSTAQIGVRK ADWFPKLSLL GSLGFAATDP SHLARKENGT WMTLPRLQWN
ILDFGRVAAG VEGAEGGRDE AEASYESVVL KALRDADVAL SRYGHQREHV VVLRRVEASA
ERASTLQQQR YRAGTASMLE WLDVERTRVV AQQSRISGDA DLLKDFVSLQ KSLGLGWQSS
AAPAS
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