| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5589 |
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| Symbol | |
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| ID | 4042453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2342296 |
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| End bp | 2343123 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637981008 |
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| Product | putative MscS mechanosensitive ion channel protein |
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| Protein accession | YP_587717 |
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| Protein GI | 94314508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.204924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA ACGCCAACGA CAGCATCGTG ATCAACGTGG TCACCAGCCT GTTCGTGGTC
CTCGTGGGCA CGATGGTGGT CAAGCTGATC AACCGCTTTT TCTCGGCCCG CCTGCAGGCC
GACAATCGCG GCAGCTATCG CGCCTGGACC GTGGCATCGC GCAACTTCGT CGCGGCGGTG
ACCTTCCTGC TACTGCTTGG CATCTGGGTA TCTGAACTGA AAAGCGTGGC GATCTCACTG
GCCGCGTTTG CCGCGGCGCT GCTGTTGGTC GGCAAGGAAC TGGTGATGTG CTTCCTGGGT
GCGTTTATGC GCATGGTCAC GCGACCGTTC CAGTTGGGCG ATCTGGTGGA AATCGGGCCG
TTCGGCGGCG AGGTCATCGA TATGGATGTG ATGTCGACCA CGTTGGTGGA GGTAGCCCCG
GCGCGTCATT ACACAGGCTT CACCGTGCAG GTGCCCAACA GCATGTTGCT GACCACGGCG
GTGCGCAACC ATTCCCAGGC CGGTGCCTAC ACGCTCGATA CCGTGCGCAT TCCGCTGGAG
GTGGGTGTGG ACCCCGAGGA TGTCGAGGCG CGCCTGATCA AGGTGGCGCG GCAGGCTTGC
GAGGACTTCA TGGAAGAAGC TGGCCGGACG CTGCGGCGCT ATGGCGACAT GCGGTTCGTC
GACCTGTCGC AGTTCGAGCC GCGCGTGCTG TTCGAGCCGG TGGACGTGGA CCGCTTCGAC
GCGATCGTGC GGTTTCCGGC ACCGGTCAGC GCCAGGCTGC CGGTAGCGCA GCAGATCGTG
CGTGGCTACT ATCGCGAGCC GGTGCGGAAG AACGTAGCGC AGCAGTGA
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| Protein sequence | MHFNANDSIV INVVTSLFVV LVGTMVVKLI NRFFSARLQA DNRGSYRAWT VASRNFVAAV
TFLLLLGIWV SELKSVAISL AAFAAALLLV GKELVMCFLG AFMRMVTRPF QLGDLVEIGP
FGGEVIDMDV MSTTLVEVAP ARHYTGFTVQ VPNSMLLTTA VRNHSQAGAY TLDTVRIPLE
VGVDPEDVEA RLIKVARQAC EDFMEEAGRT LRRYGDMRFV DLSQFEPRVL FEPVDVDRFD
AIVRFPAPVS ARLPVAQQIV RGYYREPVRK NVAQQ
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