| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5588 |
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| Symbol | |
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| ID | 4042452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2340670 |
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| End bp | 2342274 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981007 |
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| Product | putative phospholipase D/transphosphatidylase |
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| Protein accession | YP_587716 |
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| Protein GI | 94314507 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.5459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG CGTTGCAACA ACGGAGTGCG AGCGTTGGCC CCCGATTTCT GCTGGCCTGT
CTGTCGGCCT GCATCCTGGT ACTGGCAGGG TGCGCCAGTT TGCCAGCGCA TCCTGACCGC
ACGCCGAGCT ACGCGTCGAC CGATACCAGC GATACGTTGC TGGCCAGTTC CCTGGCACCA
CGGCTGGCGC GGAATCCGGG TCAATCGATC TTCTATCCGC TGGGTTCTGG GCCCGATGCG
CTGGCGGTCC GCATGGCGTT GGCGCGCGCG GCGCGCAAGA CGCTCGATCT CCAGTACTAC
TTATTTGATG CAGATACCAC GGGCAGCGCC CTGCTTGGCG AGTTGATCGA TGCCGCCGAC
CGTGGCGTGC GGGTGCGTCT GCTGATCGAC GACCTGCATT CCACCAATCA GGACAAGCTC
TGGGCGGCGC TCGACGCCCA TCCGAACATC GAGACCCGGT TGTTCAACCC GTTTGCCAAC
CGCTCCGCGC GCTGGGCCGA GATGATGGTC GATTTCGGCC GCCTGGACCG GCGCATGCAC
AACAAGCTGA TGGTGGCGGA CAACCTCGTG GGCGTGGTCG GTGGCCGCAA TATCGGAGAC
GCGTATTTCT CGGCCCGACC CGACGTCGAT TTCAGCGACC TGGATGTGAT GGTCGCCGGG
CCCGTCGTGC AGGCCGCCAG CAAGGTGTTC GACCAGTACT GGAACAGCGA GAGCGCGTAT
CCGGTGGCCG CGCTGGTGCC CGAGGGCAAG GAGGCACCTG AGGAACTGCG ACGCTTTCGC
AAGGAAGTCG AGGCAAAGGG GGACGTGGCT CGTGCCAGTC CCTTCGTGCA GGAACTGCTG
GACTCGGGGC TGGCGCGCGG CATCGAAGTG GGTCATCTGC CGGGTCACGT CGGCAGCGCG
CGCGTGATTG CCGACTCGCC TGACAAGATC GAGAACGATC CCGACGATGC GTCGACACAC
GCAATTCCCC GCCTGCGGGC GCTGATGGAG GCGGCGCAGA CCGAACTGGT GCTGATCTCG
CCGTACTTTG TGCCAGACGA TGACACCGAG AAATGGTTGG CCGCCATCGC CAAACGTGGC
GTCAAGGTGC GGGTGCTGAC CAACTCGTTT GCGGCCACGG ATGTTTCCGC AGTCCATGCG
GGCTACGCGC CACGCCGTCT GGCGCTGCTC CACGCCGGCA TCGAACTGTA CGAACTCAAG
CCCACCGCCA GTACCGGATT GACGCAAGAT CGTGGCAGAC ACGCTCGCAC CTTCGCATCG
AGCCGCGCAA CCCTCCATGC CAAGGCCTAT GTCGTCGACC GGCGGTTCCT GTTCGTGGGC
TCCCCGAACC TGGACCCGCG ATCGAGCCGG CTCAATACCG AGATGGGGGT CGTGCTCGAC
AGCCCCACGC TGGCTGCCTG GTTCGTGTCC GACGTGGACA AGCGGCTGCC CGAGATCGCG
TGGCGCATTG GGGTGCGTAC CGATGCGGCG GGTCAGGAAG GCCTGACGTG GACAACGATG
GAGCAGGGCA AGGAAGTCAC CACCGACAAG GAGCCCGGCA TGAGCGTGTG GCAGCACATC
GGCATCGACT TTCTGGGACT CCTGCCGCTG GAGGATGAGC TGTAG
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| Protein sequence | MAQALQQRSA SVGPRFLLAC LSACILVLAG CASLPAHPDR TPSYASTDTS DTLLASSLAP
RLARNPGQSI FYPLGSGPDA LAVRMALARA ARKTLDLQYY LFDADTTGSA LLGELIDAAD
RGVRVRLLID DLHSTNQDKL WAALDAHPNI ETRLFNPFAN RSARWAEMMV DFGRLDRRMH
NKLMVADNLV GVVGGRNIGD AYFSARPDVD FSDLDVMVAG PVVQAASKVF DQYWNSESAY
PVAALVPEGK EAPEELRRFR KEVEAKGDVA RASPFVQELL DSGLARGIEV GHLPGHVGSA
RVIADSPDKI ENDPDDASTH AIPRLRALME AAQTELVLIS PYFVPDDDTE KWLAAIAKRG
VKVRVLTNSF AATDVSAVHA GYAPRRLALL HAGIELYELK PTASTGLTQD RGRHARTFAS
SRATLHAKAY VVDRRFLFVG SPNLDPRSSR LNTEMGVVLD SPTLAAWFVS DVDKRLPEIA
WRIGVRTDAA GQEGLTWTTM EQGKEVTTDK EPGMSVWQHI GIDFLGLLPL EDEL
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