| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5585 |
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| Symbol | |
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| ID | 4042449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2337770 |
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| End bp | 2339212 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981004 |
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| Product | major facilitator protein family permease |
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| Protein accession | YP_587713 |
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| Protein GI | 94314504 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGG CGTATGGCTG TGGCAGGGGC GAATGGCACC ATTACAGCAT GGCTCGCCGT
CTCTTGCCAT GCGTTCAGCG CATGACAAAA CGCCCGAAAT GTCGGTTGAA CCGCCGCACC
GGTGCGCATG AAATGGAGGA CATTCAACGC CTTCATCCGA CCGACAGCAT GACCGACGCT
CCCCGCTCCC ATACTCGTGC CGCATCGCAG CCCGCGGCCC CGGCGCCATG GTGGCGCGAT
ACCGTCTTCC TGTTGCTGGC CGGCGGGCTG GTCATGGGGC TGGCGCTGGG CGCGCGGCAC
GTGCAAGGGC TGTTCCTGCT GCCGATCATC GGCGACCGAG GCTGGACGCG TGAGTCGATT
GGCTTGGCCA TGGCCGTGCA AAACCTGACC TGGGGCATCG CGCAACCATT CACTGGCATG
GTGGCCGACC GGTTCGGCTC CTGGAAGGTG ATGCTGGCCG GTCTGGTGCT GTACGCGCTG
GGCCTCTACG GGATGGCGGT GATCACGAGC GCGCCGGCAT TCATGCTGGT CGCCGGGGTT
TGCATCGGCG TGGCGCAGTC TGGGACGACG TTCGGCGTGG TCTATGGCGC GCTGAGCCGC
ATGGTGCCGC CAGAGGACCG CAGCCGCACG CTGGGCATCG CCGGGGCGAT CGGTGGCATC
GGCCAGTTCC TGATGGTGCC GTCCGCGCAG GCGCTGTTGT CGTTCACCGG CTGGACGAAC
GCGCTGATGG TGCTGGCGGT ATGCGCGGCG GTGTTGATCC CGTTCGCGTT GCCGTTCCGC
GATCGCGCGC CGGCATCCGA TGCTGCTACC GGCGGCCAGC CACCGATGCC GATGCTGGCC
GCCATCCGCG AGGCTTTCAG CCACTCGGGC TTCTGGCTGC TCAACCTCGG CTTCCTGGCA
TGTGGCTTCC AATTGGCCTT TATCGCCAAC CATCTGCCCG CCTACCTGCG TGACAAGGGG
ATGCAGCCCG CTGACGGCAT GGCCGCGCTG GCCATCATCG CGCTGGCCAA TATCTTCGGC
ACCTATGTGT TCGGCTGGCT GGGCGGGCGA CATACGCGGA AGTACCTGCT GGCCGGCATC
TATCTGGCGC GTACGTCGGC AATGGCCCTG TTCGTGCTGC TGCCCCTGAG CTCGATGAGC
CTGTATGCGT TCGCAGCGGT GATGGGCTTC CTGTGGCTCG GTACGGTGCC GCTGACCAGC
GGCATCGTCT CCCAGGTGTT CGGCGTGCGC TACATCACCA CGCTGTTCGG CTTCGTCTTC
TTCGGCCACC AGCTTGGCTC GTTTCTGGGC GTGTGGCTGG GTGGGGTGGT GTTCGAGCTG
ACGCGGTCCT ATGACCTGGT CTGGATGGGG GCGATGGCAC TGGGCGTGAT CGCCGCCGCG
CTGCACTGGC CGATTGACGA TCGGACGATC GCGCGCGTGC CGATGCGCCC GGCACGGGCA
TGA
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| Protein sequence | MTGAYGCGRG EWHHYSMARR LLPCVQRMTK RPKCRLNRRT GAHEMEDIQR LHPTDSMTDA
PRSHTRAASQ PAAPAPWWRD TVFLLLAGGL VMGLALGARH VQGLFLLPII GDRGWTRESI
GLAMAVQNLT WGIAQPFTGM VADRFGSWKV MLAGLVLYAL GLYGMAVITS APAFMLVAGV
CIGVAQSGTT FGVVYGALSR MVPPEDRSRT LGIAGAIGGI GQFLMVPSAQ ALLSFTGWTN
ALMVLAVCAA VLIPFALPFR DRAPASDAAT GGQPPMPMLA AIREAFSHSG FWLLNLGFLA
CGFQLAFIAN HLPAYLRDKG MQPADGMAAL AIIALANIFG TYVFGWLGGR HTRKYLLAGI
YLARTSAMAL FVLLPLSSMS LYAFAAVMGF LWLGTVPLTS GIVSQVFGVR YITTLFGFVF
FGHQLGSFLG VWLGGVVFEL TRSYDLVWMG AMALGVIAAA LHWPIDDRTI ARVPMRPARA
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