Gene Rmet_5572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5572 
Symbol 
ID4042433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2325781 
End bp2326728 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID637980990 
ProductDyp-type peroxidase 
Protein accessionYP_587700 
Protein GI94314491 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACG ACCCGATCGA ACCCCAGGCC GTCTATCAAC CCATTACCCG CAGCGCGATC 
TTCATCGTCG CGACGCTGAC GCCCGGTGCC GAGCACGCCG CGACCGTGCG TGCCTGGTGC
GCGGATGTCG CAGCGCTCGT GCGGTCCGTC GGCAAACGTG TGCCGGGCGG CAATCTGTCA
TGTGTCTGCG GCTTTGGCAC CGACGCCTGG GATACGCTGT TCGGGGGCCC GCATCCCGCA
TCGCTACATG CATTCCGCGA GTTCGGCGCC GGCGATCGAC GCGCCGTGGC CACGCGGGGC
GATCTGCTGC TGCATATCCG CGCGGAACAT ATGGATCTGT GCTTCGAACT CGCGACCCAG
TTGATCGGCC GGCTCGGCGC GGCGGTGACC GTGGTCGACG AAGTGCATGG CTTCCGCTAC
TTCGACATGC GCAGCATGGT GGGCTTTGTC GACGGCACTG AGAATCCGGT GGATCGCGAA
GCTGTGGATT TCACGATCAT CGGTGACGAG GACCTATCGT TCGCAGGCGG CAGCTACGTG
ATCGTGCAGA AGTACCTGCA TGACATGACC GGCTGGAACG AGCTTTCCGT CGAGGCGCAG
GAGCGCATCA TCGGGCGGAC CAAGTTGTCC GACATCGAAC TCGATGAGTC GATCAAGCCG
ACGTGCTCGC ACAGCTCGCT GACGACGCTG GAAGAGGACG GCAAGGAAGT GAAGATCCTG
CGTGACAACA TGCCGTTCGG CTCACCCGGC AAGGGCGAGT TTGGCACCTA TTTCATCGGC
TACGCGCGCT CGCCCGCGCC GATCGAGCAG ATGCTCGAGA ACATGTTCGT CGGGCGTCCA
CCGGGCAATT ACGACAGGCT GCTCGACTAC AGCAAGGCAG TCACCGGAAG CCTGTTCTTC
GTGCCGTCTC AAGCGCTGCT CGAAGCGCTC GCGGAACGCA ACCCATAG
 
Protein sequence
MPNDPIEPQA VYQPITRSAI FIVATLTPGA EHAATVRAWC ADVAALVRSV GKRVPGGNLS 
CVCGFGTDAW DTLFGGPHPA SLHAFREFGA GDRRAVATRG DLLLHIRAEH MDLCFELATQ
LIGRLGAAVT VVDEVHGFRY FDMRSMVGFV DGTENPVDRE AVDFTIIGDE DLSFAGGSYV
IVQKYLHDMT GWNELSVEAQ ERIIGRTKLS DIELDESIKP TCSHSSLTTL EEDGKEVKIL
RDNMPFGSPG KGEFGTYFIG YARSPAPIEQ MLENMFVGRP PGNYDRLLDY SKAVTGSLFF
VPSQALLEAL AERNP