Gene Rmet_5553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5553 
Symbol 
ID4042414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2300590 
End bp2301741 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content60% 
IMG OID637980971 
Producthypothetical protein 
Protein accessionYP_587681 
Protein GI94314472 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCA TTGGCGAGAG TCAGTACTAT CGCCACGGCA AATCGCCCGA CAGTGAATTC 
AAGCTTGCAC TGCAGGCCAT TCTGGCTGCT TGCAAAGATG CCGGCATCGA TCCGCGCGAG
ATTGACGGCT TCTCGTCGTT CAGTGATGAC CGTAACGATC CTTCGCGAAT TGCCGCTGCA
CTGGGCCTTC CCAGGCTTAG GGCGACGACG ATGCAATGGG GGGGCGGCGG TGGCGGCTGC
TGTGCGGCAG TGGCCAATGG CGCAGCTTCC ATTCAGGCCG GCTTGGCGGA TTGCGTGGTT
GTCTTCCGCT CCCTCGCTCA GGGCCAGTTT GGACGCTTTG GTCGCACTTC CGGCGTCGAT
ACGATTTCCG GGGAAAAGGC ATACCTGATG CCTTACGGGG TGCTCACGCC GCCTCAGCGT
TTTGCCATGC GAGCACGACG GTTCATGCAT GACCACGGCG TCCGGCAGGA AGCCCTGCGC
GCCATTGCAT TGGCGTCCTA CCACCACGCG CAGTCCAATC CTCGGGCCGT TATGTACGGA
AAGCCGCTGA GCGAGGAGAA GTACGACCAG TCGCGATGGA TTGCCGAACC GTTCCATCTG
TTTGACTGCT GCATGGAAAA TGATGGGGCT GCGGCCGTGA TCCTCGTATC GGCAGAACGT
GCGAAGGATT TTCCGGGCAA AGCGGCGTAC ATCCTCGGAG CCGCCGCAGG CTCCGGGTAT
CGAACCGGCG CCATCCCCCA TAACTCGCCG CTCTATGGCA GCGCCAGCTT CGACACTGTA
GCGCCCGACC TATTCAAGAT GGCCGGCATC AGCCATACCG ATGTGGGTGT AGTTCAGAGC
TATGAGAATT TCACGGGTGG CGTGGTGATG GCGCTTGCGG AGCACGGATT CTTCAAGCCG
GACGAGGCGA ACGAGTTCCT GACCCTGGAA AACCTTATCG CTCCGTCCGG GAAGCTCCCG
CTAAACACGA GCGGAGGAAA CCTTGCAGAG TGCTACATGC ATGGCTTCGA ACTCGTCCTT
GAAGCTGTCC GTCAAATTCG CGGTACATCG TGCAACCAGG CTCCGAAGAA CGATGTTGCC
TTGGTAATCG GTGGGCCGAT GGTAACCCCT GTCAGCAATC TTTTGCTGGC ATCGCAGGAG
GTGGCGCAAT GA
 
Protein sequence
MIGIGESQYY RHGKSPDSEF KLALQAILAA CKDAGIDPRE IDGFSSFSDD RNDPSRIAAA 
LGLPRLRATT MQWGGGGGGC CAAVANGAAS IQAGLADCVV VFRSLAQGQF GRFGRTSGVD
TISGEKAYLM PYGVLTPPQR FAMRARRFMH DHGVRQEALR AIALASYHHA QSNPRAVMYG
KPLSEEKYDQ SRWIAEPFHL FDCCMENDGA AAVILVSAER AKDFPGKAAY ILGAAAGSGY
RTGAIPHNSP LYGSASFDTV APDLFKMAGI SHTDVGVVQS YENFTGGVVM ALAEHGFFKP
DEANEFLTLE NLIAPSGKLP LNTSGGNLAE CYMHGFELVL EAVRQIRGTS CNQAPKNDVA
LVIGGPMVTP VSNLLLASQE VAQ