| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5514 |
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| Symbol | cpnA |
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| ID | 4042375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2260028 |
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| End bp | 2260822 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637980932 |
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| Product | cyclopentanol dehydrogenase |
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| Protein accession | YP_587642 |
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| Protein GI | 94314433 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTTG AGAAAAAAGT CGTTTTGGTA ACGGGTGCGG CCAGTGGAAT CGGACGTCAG
ACTTGCGTCA CGTTGGCAGC TGCTGGGGCG CGTGTCTTCG CAAGTGATCT CAATGAAGAG
GGTGCCGCGC AGACCGTTGC GCTCATTCGC GACGCTGGCG GTGTCGCCGA CAGCCTGGCG
CATGATGTCA CTGAGGAGAG TGCGTGGCAT GCAGTCGTGC AGAAAATTGA GTCGGCGTCT
GGCCGGCTCG ATGGCCTGGT CAATAGCGCA GGGCTAATGG TTGTCCGACC ATTCCTGGAG
ACCGACCTAG CATTGTATCG CCGTCAGCAG GCCGTCAACG TTGACAGCGT GTGGCTCGGG
TGCCAAGCAG TCTGCAAGTT GATGACGAAA ACGGCGGCCG AATTTGGGAG CGCCTCCATC
GTGAATCTCT CTTCTATCCT TGGCCTGAAA GGTGGAAGCA TGCACTCGGC GTACTGCACG
TCGAAAGGTG CAGTTCGCTT GCTTACGAAG GCACTCGCCG TCGAGCTCGG AAGATCGCGG
ATTCGGGTCA ATTCGGTCCA CCCGGGGCTA GTTGAGACCC CGCTTGGGTT AGGGTCCATG
AAGGACATGA TTAGCCACGG GGTCCCGCTG GGTTCTCTGG ACGCCGCCGT CGACATGGTT
GCACACCGCA CGCCTCTAGG TCGATGGGCA CAACCCGTTG ACGTGGCGAA TGTCATCGCG
TTCCTTTGTG CAGACGAGTC TCGATTCGTC ACTGGCACTG AGCTTACTGT CGACGGAGGC
TACAGCGCTG CCTAG
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| Protein sequence | MQLEKKVVLV TGAASGIGRQ TCVTLAAAGA RVFASDLNEE GAAQTVALIR DAGGVADSLA
HDVTEESAWH AVVQKIESAS GRLDGLVNSA GLMVVRPFLE TDLALYRRQQ AVNVDSVWLG
CQAVCKLMTK TAAEFGSASI VNLSSILGLK GGSMHSAYCT SKGAVRLLTK ALAVELGRSR
IRVNSVHPGL VETPLGLGSM KDMISHGVPL GSLDAAVDMV AHRTPLGRWA QPVDVANVIA
FLCADESRFV TGTELTVDGG YSAA
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