Gene Rmet_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5506 
Symbol 
ID4042367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2250197 
End bp2250751 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content56% 
IMG OID637980924 
Producthypothetical protein 
Protein accessionYP_587634 
Protein GI94314425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG AAAAGACTAG TACGAGTTCC TCGGAACATC GGCGACCCAA ACGGATACAG 
TTCTTCCATG CCGCAGATGC ACAGGACCTT CTCGAGTCCG GCGCGATGCA TTTTAAGCCG
TTGCCCCCGG AAAGGGCGGA GCTCAACCCG GTCTTTGCGC AAGGTGTCAA GGAAGGGTCT
GTATCGAGGC TGCTCTTCCA AGCGGAAAAT GGCTTCAGCC TCGTCTACTC TTGGTTCAAG
AGCGGCTTCC GGCTACCTGC GCACTCGCAC GATACGGACT GCTTGTATTA CGTAATCTCC
GGTGAGATCC GCTATGGTAC GCAGGTGCTC GGTTGTGGCG ATGGCTTCTT TGTGCCGGCA
CATACCGTCT ACGGTTATAC GCCTGGTCCG CAGGGTGTTG AAATTCTTGA GTTCCGAAGT
GTTAGCGAGT TCGACATCGA GTTGATCAGC GCACCGATGT CGGCTTGGGA GCGTGCGGCC
CATATGGTGC AAAGCAGTCT TGAGAGGTGG CGCTCGGAGA ACCCGCCAGC CCGTGCTTCA
TCGGGATTGG GATAA
 
Protein sequence
MATEKTSTSS SEHRRPKRIQ FFHAADAQDL LESGAMHFKP LPPERAELNP VFAQGVKEGS 
VSRLLFQAEN GFSLVYSWFK SGFRLPAHSH DTDCLYYVIS GEIRYGTQVL GCGDGFFVPA
HTVYGYTPGP QGVEILEFRS VSEFDIELIS APMSAWERAA HMVQSSLERW RSENPPARAS
SGLG