Gene Rmet_5503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5503 
Symbol 
ID4042364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2246240 
End bp2247208 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content57% 
IMG OID637980921 
Productextra-cytoplasmic solute receptor 
Protein accessionYP_587631 
Protein GI94314422 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA GACGACAGAC GTTGGGATTG CTCTCGGCGT TAGCAATGGG ATCCAGCTTC 
GCTCAGGGCC AGCGCTGGCC AAGCAAGCCG ATTATGTTGG TCGTGCCTTT TCCGCCCGGT
GGGCAGACAG ACGCCGTCGC GCGCAGTGTA GCGCGCCAGT TGGAGACCAC CCTCCGTCAG
CCGGTTGTCA TTGACAATCG GCCAGGGGCA AACTCGCTGA TCGGCACCCA GCTGGTATCT
CGATCCGCTC CGGACGGGTA CACCCTGCTG TTCAATATGA CGGCGCTGGT TAGTAATCCT
ATCCTGCAAC CGAACGCTCG ATACGATGCG CTCAAGGAGT TTGTCCCGAT AGGTCGGATC
TATGAGATCC CGGCAGTGTG GTCGGTACCC CCAAAGTCGG CACAGACACT CGAGCAATTT
ATCGGACTCG CCAAGAAGGC AAAGGACCCC CTCAGCTTCG CCACTACCGG CCATGCGTCG
AGCTCACACT ACTTCGGTGA AATGTTCGCG CGCGCCGCAG GCATTCGACT TAATCATGTG
CCTTACAAAG GCGAAAGTCC CATCATACCG GACCTGATTG GTGGTCGGCT CGACGCCGCT
GTCGTATCAA GCGCAACCGC ATTGCAGTAT GGCAAGGACG GCCGCATTCG AAATCTTGCA
GTATCCGGAT CTCACCGCTG GAAAGCCATT CCAGACGTGC CGACCTTCCT TGAACTTGGC
GTTCCAGGAA TGACAACCGA AACCTATGCG GGGATTTTTG CACCCGCTGG CACCCCACGC
GTCGTTGTGG ATCAATTACA CGCGGCAATT ACGACCGTAT GTAAGACCCC AGAGTTGCAG
CGTCAACTAT TGGACAACGG CCTGGAAGTA GCGCCGACGC TGAGTCCAGA TCAGTTTGAG
GCACTCATGC GCAAATCTCG AAACGAGTGG CTGGCCATCA AGGAAAACAG CGCGATTCGG
GTGGAATAG
 
Protein sequence
MTTRRQTLGL LSALAMGSSF AQGQRWPSKP IMLVVPFPPG GQTDAVARSV ARQLETTLRQ 
PVVIDNRPGA NSLIGTQLVS RSAPDGYTLL FNMTALVSNP ILQPNARYDA LKEFVPIGRI
YEIPAVWSVP PKSAQTLEQF IGLAKKAKDP LSFATTGHAS SSHYFGEMFA RAAGIRLNHV
PYKGESPIIP DLIGGRLDAA VVSSATALQY GKDGRIRNLA VSGSHRWKAI PDVPTFLELG
VPGMTTETYA GIFAPAGTPR VVVDQLHAAI TTVCKTPELQ RQLLDNGLEV APTLSPDQFE
ALMRKSRNEW LAIKENSAIR VE