Gene Rmet_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5500 
Symbol 
ID4042361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2244008 
End bp2244406 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content55% 
IMG OID637980918 
Producthypothetical protein 
Protein accessionYP_587628 
Protein GI94314419 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAC CCCACGTTGA TCGCCCTCTT GCTGCCCCAG TTGTTGACGC AAGCAACGAA 
AGCTACTGGC GCTATGCGCG TGAAGGCATG CTCAGCTCAC GACGCTGCAA GTCTTGCAAG
AAGCTGCATT GGTATCCTCG CGCCCTTTGT CCGTTCTGCC AAGGCGAAAC GGAATGGGAA
TGCCTTTCGG GCAACGGCAC AATCTACAGT GTCAGCGTAA CCCGCAAAGC AGGGCCAATC
CCCTATGCCA TCGCATACGT TACGCTCGAC GAGGGCCCGA CGATGCTCAC AAACATTGTC
GACTGCGATT TGGATTCGCT GAAGATCGGA CAGCGCGTGA AGGCTTGCTT CAAGCCTTCC
GAAGGAGACA GTCCAATCCC GATGTTCACA CCTGCTTAA
 
Protein sequence
MTTPHVDRPL AAPVVDASNE SYWRYAREGM LSSRRCKSCK KLHWYPRALC PFCQGETEWE 
CLSGNGTIYS VSVTRKAGPI PYAIAYVTLD EGPTMLTNIV DCDLDSLKIG QRVKACFKPS
EGDSPIPMFT PA