Gene Rmet_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5451 
Symbol 
ID4042312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2200210 
End bp2200857 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID637980869 
Producthypothetical protein 
Protein accessionYP_587579 
Protein GI94314370 
COG category[S] Function unknown 
COG ID[COG3826] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG AGGCCTACGA CTGGATGAAC ATCGGGATTT CGCTCGATGC TTATGGAAAC 
GCCGTGCTGC CCGGCCTTCT GACGGTGGAG CAATGCGATG GACTCGCGGC ACTCTACCCC
AATGAGAAAG GCTACCGCAC ACGGATCGTC ATGGCGCGCC ATGGATTCGG GCGCGGCGAG
TACAAGTACT TCGCTTACCC GTTGCCACCG CTGCTGGAAC AGCTACGCCA CGCGCTGTAC
CGCCGGCTAG CCCCGATTGC GAATCGCTGG AATCTGCAGT TGGGAATCGA CGTGCAGTAC
CCGGATGATC TGGTCGCATT CCTGCGACGG TGCCACCAGG CGGGCCAGAC CCGGCCGACA
CCGCTGATCC TTCAGTACGG TGAGGGCGAC TACAACTGTC TTCACCAAGA CCTATACGGC
GAGCACGTCT TTCCGCTGCA GGTGGCCATC CTGCTGTCGG AGCCCGGCAA GGATTTCGCT
GGCGGAGAGT TCGTCATGAC AGAGCGTTCC ACAAAAGGTC AGCGCGCGGA TGTGGTTTCG
CTGCGTAAGG GTGACGCGTT GGTATTTACC GTGAATCATC GGCCTGCGAT GGGACGGAGT
GGCGCTCGCA AAGTCTCCAT GCGCCATGGC GTCAGCCGCA TTCTCTGA
 
Protein sequence
MTPEAYDWMN IGISLDAYGN AVLPGLLTVE QCDGLAALYP NEKGYRTRIV MARHGFGRGE 
YKYFAYPLPP LLEQLRHALY RRLAPIANRW NLQLGIDVQY PDDLVAFLRR CHQAGQTRPT
PLILQYGEGD YNCLHQDLYG EHVFPLQVAI LLSEPGKDFA GGEFVMTERS TKGQRADVVS
LRKGDALVFT VNHRPAMGRS GARKVSMRHG VSRIL