| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5446 |
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| Symbol | |
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| ID | 4042307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2196627 |
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| End bp | 2198081 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980864 |
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| Product | putative MFS superfamily transport protein |
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| Protein accession | YP_587574 |
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| Protein GI | 94314365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAACCT CTGCCATCAA GATACGTGGC ATCGATGATG TCATCGCCTT CATAGATTCC
TGTCCAGGCA TTCGCGGCCG CGCCGGCGTC ATCTGGTGGC TGGCACTGGG CGGACTGTTC
CTCGACGCAT TCTCCAATTC CGCACTGAGC GCGGGCCTAG GGCCCATGAC GCGCGACCTG
AAGCTGGAAC CGGCGCAGGT GGCATTGCTG ACGTCGTTCG CTTCGTGGGT GGCCATCGCC
TTCAATCCGC TGGGTGGCTG GATGGCTGAC CGCTGGGGCC GTGTCAAACC GCTGATCCTG
GCCAAGGTCT TTGCCGTCGT GGGTGCCTTG CTGGTGGTAT TCGCGCCCGA TTTCAACGCG
ATTCTCGTGG GACGTTTCTT CGTCGGTGCC GCGTACGGTA TCGACTTCGC CATTGCCATG
GCGGTATTGG CGGAGTTCAC GCCCGTGAAG CTCAAGAGCC GTCTCAATAC CTGGCAGGGC
ATGTGGTACA CGGCTGTTTG CCTGAACCTG CTGCTCGCGT TGTTGTTTTA CTCGTGGCAA
GTCGGTGACA CGATCTGGCG TTACTCGGTG GCGGCCACGG CTGTGTTTGG CGTCGGCATC
CTGATCTTGC AAGTACTGTT CCTGGTGGAA AGCCCGACAT GGCTGGCGCG CAAGGAGCGC
CTCGAAGCCG CCGCGCAGGC CATGACACGC ATCTACGGTC GTCCGTTCGA AGCTGCGCCA
CTGGCCGAGC GCGTTCCGGT GACCAACATG GCACGCCGCG GTCTCGCCAA CGTGCTGCTG
ATCTTCCGTG GCATCTATTT GCCCCGCACG ATTCTGGCGG CCACCGTGCA GATCGGTCAG
TCGATCCAGT ACTTCGGCAT TGGCTGGTAT CTGCCGCTGA TCAGCGCGGC GCTGTTCGGC
AAGGACTTTG TCTATGCCAC GATTGGCGCG CTGGTGTTCA ATGTGTGTGG CATCTTCGGT
GGCTTCCTGT CACCGGTGAT CGGCCGCAAG CTCGGCCTGC GCCGTGCTTC CGCGTACGGC
TTCGCGGCGG TGTTCGTGAT GCTGCTGATT CTTGGCCTGT TCAACGGCAA GATGCCCACA
TGGGTGGCCG TGGTCGTGCC GTCGCTGTTC ATCCTGTTCC ACTCGGGCGG CCCTGGCGCC
AATGGCAAGA GCTTGTCGTC GCTGTCATTC CGCAGCGAAC TGCGCGCGGG CGCCAACGGC
GTTATCGGCG CGCTGGGTGC CATCGGAGCC GCGCTGGGCC TGCTGGTATT CCCGCTGTTT
CGCGCGCGCT ACGGGCTCGA AACCACTTTC CTGATTCTCT CCGTCGTGCC GCTGGTGGCC
AGCATTATCT GCTTCCTCAT TCGCTGGGAC CCCACGCGCA CGGCCATTCA TCCCGATAAC
GAAGCCGATG CGCCGCAGTT CCGCAGCGAT GCACGCGACG GCGCCGGCTT CATGCATCCC
GCTACAGAGA AGTAA
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| Protein sequence | MQTSAIKIRG IDDVIAFIDS CPGIRGRAGV IWWLALGGLF LDAFSNSALS AGLGPMTRDL
KLEPAQVALL TSFASWVAIA FNPLGGWMAD RWGRVKPLIL AKVFAVVGAL LVVFAPDFNA
ILVGRFFVGA AYGIDFAIAM AVLAEFTPVK LKSRLNTWQG MWYTAVCLNL LLALLFYSWQ
VGDTIWRYSV AATAVFGVGI LILQVLFLVE SPTWLARKER LEAAAQAMTR IYGRPFEAAP
LAERVPVTNM ARRGLANVLL IFRGIYLPRT ILAATVQIGQ SIQYFGIGWY LPLISAALFG
KDFVYATIGA LVFNVCGIFG GFLSPVIGRK LGLRRASAYG FAAVFVMLLI LGLFNGKMPT
WVAVVVPSLF ILFHSGGPGA NGKSLSSLSF RSELRAGANG VIGALGAIGA ALGLLVFPLF
RARYGLETTF LILSVVPLVA SIICFLIRWD PTRTAIHPDN EADAPQFRSD ARDGAGFMHP
ATEK
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