Gene Rmet_5440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5440 
Symbol 
ID4042301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2190175 
End bp2190690 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID637980858 
Producthypothetical protein 
Protein accessionYP_587568 
Protein GI94314359 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.651867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT GGTCCGCATG GTCCGCATGG TCCGCATGGT CAGAAAGGCC TGAACTTCCT 
AGCTCGACAT TCGAAGTGGA AAAAGGCTGG ATCGACGAGT ACGGTCATAT GAACGCTGCC
CGGTATGTGG AGGTGTTCGA CCGCGAGGGC TTCAAGCTGC TTGAGCAACT CGGCGTGGGG
CTCGGCTACA CCGAGGCCAC CCGCTGCGGG ATCTACACTG TCGACATCCA TGTGGCCTAC
TACCGCGAAC TGCTGGTCGG ATCTCCGGTT GTGCTGCGCG TGCGCGCATT GCAGTCCGAC
GACAAGCGTC TGCTTTGCCT GATGGAACTC TCCCATGCCA CCGAGGGATA CGTGGCGGCC
ACCATGGAAC AGCTCTCGGT ACACGTGAAC CTGGAAACGC GCAGGGCGGC ACCGTTCCCC
GGGGCGCTTG CCGAGCAGCT GGCGCTCGCC GTCAAGGCTC ACGCCGCGCA TCCGCTGCCG
GCCGGCTGCC GCACCCTGCT GTCCCTGAAG CGCTGA
 
Protein sequence
MSAWSAWSAW SAWSERPELP SSTFEVEKGW IDEYGHMNAA RYVEVFDREG FKLLEQLGVG 
LGYTEATRCG IYTVDIHVAY YRELLVGSPV VLRVRALQSD DKRLLCLMEL SHATEGYVAA
TMEQLSVHVN LETRRAAPFP GALAEQLALA VKAHAAHPLP AGCRTLLSLK R