| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5436 |
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| Symbol | |
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| ID | 4042297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2182601 |
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| End bp | 2185315 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980854 |
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| Product | LuxR family LuxR family transcriptional regulator |
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| Protein accession | YP_587564 |
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| Protein GI | 94314355 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGC CGCCGAGCAT GACACGGCAT GTGCCGAGCA TGAAGCTCAG GCCGCCAGTT
GCCCCCGCAT CCCAGGTGAT CCGGCAAGGC GTTGGCGACA TGCTGCGCGC CGCGTCGTCG
GCCAGGCTCG TGATCGTCCG GGCGCCTGCG GGGTTCGGCA AGACGACCGC CATGCTGCAG
TACCGCGCGC GGCTGGAGGC GGCCTCGGTG GCAACCGCAT GGCTCACGCT CGATAACGCC
GACAACGACC CGGTACGCTT TCTATCCGGC TTCGAGGCGG CGCTGGCGGC CATCGTCGGG
GACGACGCCA TCGCGGATAT CGGCCGACCC GCGCCACGCA CCACCGGCGA AGCCGCGCTG
CAGAGCATGG ACTGCCTGGC AGGCTACCCG GAGCCGTTCG CATTCTTCCT CGACGATTTC
GAAGTGCTTC AGGAGCCCGG GGTCATCGCC TGGGTGCGCG AGATCATCGA CCATCTGCCG
CATAACGGGC AGCTCATCAT CGGCTCGCGC AGCACGCCCG ATGTGAGGCT GGGCCGCCTG
CGCGCCCGCG GCCAGTTGCT GGAAATCGAT GCCACGGCCC TGCGTTTCTC GATCGAGGAA
ACCGAGCAGT TCTTCCGCAC CGTGCGGCCG ATGCCGCTTG CGGCAGATGA TCTGCAGCGC
CTGTATCGCA AGACGGAGGG CTGGGCGGCC GCGTTGTCGC TCGCATCGGC TTCGCTGGAG
CGCAGCGAAG CGCATACTGA GTTCATCGAC CGTTTCTCGG GCACCAGCCG GTCGGTGGCC
GACTATCTGG CCGAAGACGT GGTGGCCCGG CAGCCCGAGC CGGTACGCCA GTTCCTGCTG
CGCACCAGCA TCCTGCGCTA TCTGAACCCG CAGCTGTGTC ACGTGTTGCT GCCCGATGTG
GATTGCGAGG CGATCCTGCG GCAGCTCGAG TCTTCCAGCC TGATCGCGCC GATCGAGAGT
GAAGACCGGG CGTGGCGTTA CCACAGCCTG ATCGCCGAAT TCCTGAAGGC GCAATTGCAG
CGCGAAGCGC CTGCCGAGGT GCCGCGCCTG CACCATGCCG CCGCCGGATG GTTCCAGTCA
CAGGATCGTC CCGTGCCCGC CATCGACCAT GCGATCGAAG GCGGAGATTA CGCGTATGCC
GTGACGCTGC TGATCGCACA CGCGCCGGCG CTGCTCGGGC AGGGGCGTAT GCGGCTGCTC
ACACGCTGGT TCGACGCACT GCCCGAGGAC GTCCTGCGCG ATCACCTGCC GCTGCAGGCC
ATCCGGATCT GGGCCCTGAC GTTCACGCGC GGCCCCCTGG AGGCGATGGA CCTGCTGGAA
CGCAGCGGGC TGCGGGACTC CGACGATCCG GCGGTGCGTC CGCATGTACT CGCGCTGCGC
CCGACGCTGC TGTCGATGAT GGACCAGCTC GAGCGCGCGC TGGAAGTCGG GCGCGAATGC
CTGACGCACT GGCCCACCGG CGTGGCCTTC GCGGACATGG TGCTTGCCAA TGCGATGGCG
AACGTGTTCG CGGTGTCGGG GCAGCATGTC GAATCGCGCC GTCTGCTGGA AACCGCACGC
CGCACGCAGG GCGCCGACAG CAGCGCCTTC AACATGATGT ACTCCGAAAC CGTCGAGGCC
ATCTTTGACC TGCAAGGCGG GCGCCTGCGC GAGGCCACGG CGCGTCTGCG GATCGCTGTT
GGTAGCGGTA GCACGCAACA CTACGGCTAC ACGGGCGGCA ATGCCTGGGC CGGCGTGATG
TATGCGGCCA CGGTCTATGA GGCGAACGAT CTGGCCCAGG CCGCGCATCT GCTGCGGGTC
TATGTGCCAC TCGCGCGCGA TGTGCTGCTG GGCGATCACG TCACGCTCGG GCACGTCATG
CTGTCGCGCA TTGCCTTTGC CAGAGGCGAT GTGGACGAGG CGTTCGAGAC GCTGACGCAG
CTCGAGTATC TGGGCCACGT CAGACGCCAG GCGCGCGTGG CGGCCGGCGC CAAGCTCGAA
CGTGCCCGCA TCCTGCTGAT GCAGGGGCAT ACCAGGGCCG CGAAGGACGA ACTGGCGCGT
GCCGACGACC CGGCCCTGTG GGAACGTGTG GGCCGTCTGC ACCTGATCGC CAACGATCTG
GATTACCTGG AACTCGCGCA ACTGCGCTGG GAGGCGCTGG CCGGCGACGC ACAGGCCGCG
GTGGCCCGCC TGCGGGCAGC CGCCGAGTTT GCCGACCACG ATGGGCGTCA TCGACGGGCC
ATGAAGCTGC GGTTGCTGTG CGCGCTGGCG TATCAACGCG CCGGCGAACC TGCAGCGGCG
CAGGCGATAT TGGCGCCTGT GCTGAAGGCT GCCTGCGCGG AAGGCTTCGC GCGATTGCTG
CTCGACGAAG GCGGCAATCG CATCGGGCCG CTGCTGGCGC AGTTCTCGCG GACGCTGGAG
TCGAGCGGCG GCGCCCAGCG CGATCCCGTT CTGGCCGAAT TCGTGATGCG GCTGGTGCAG
GCATGTGGGC CGCTCGAGGA GTCTCCGGAG CCAATCGCGG GAGACCGGCC GCAACTGCTG
GATCCGCTGA CGCCAAAGGA AATCCGCGTG CTGCAGCTGC TTGCCGAGGG CTATTCCAAC
AGCGCCATCG CGGAGAAACT GTTCGTCTCC GACAGCACCG TGCGCACGCA TCTGCGCAAC
ATCAACAACA AGATCTGTGC CCACAGCCGC ACGCAGGCCG TTGCCATCGC GCGCCGCCTG
GGTGTGATTG CCTGA
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| Protein sequence | MTSPPSMTRH VPSMKLRPPV APASQVIRQG VGDMLRAASS ARLVIVRAPA GFGKTTAMLQ
YRARLEAASV ATAWLTLDNA DNDPVRFLSG FEAALAAIVG DDAIADIGRP APRTTGEAAL
QSMDCLAGYP EPFAFFLDDF EVLQEPGVIA WVREIIDHLP HNGQLIIGSR STPDVRLGRL
RARGQLLEID ATALRFSIEE TEQFFRTVRP MPLAADDLQR LYRKTEGWAA ALSLASASLE
RSEAHTEFID RFSGTSRSVA DYLAEDVVAR QPEPVRQFLL RTSILRYLNP QLCHVLLPDV
DCEAILRQLE SSSLIAPIES EDRAWRYHSL IAEFLKAQLQ REAPAEVPRL HHAAAGWFQS
QDRPVPAIDH AIEGGDYAYA VTLLIAHAPA LLGQGRMRLL TRWFDALPED VLRDHLPLQA
IRIWALTFTR GPLEAMDLLE RSGLRDSDDP AVRPHVLALR PTLLSMMDQL ERALEVGREC
LTHWPTGVAF ADMVLANAMA NVFAVSGQHV ESRRLLETAR RTQGADSSAF NMMYSETVEA
IFDLQGGRLR EATARLRIAV GSGSTQHYGY TGGNAWAGVM YAATVYEAND LAQAAHLLRV
YVPLARDVLL GDHVTLGHVM LSRIAFARGD VDEAFETLTQ LEYLGHVRRQ ARVAAGAKLE
RARILLMQGH TRAAKDELAR ADDPALWERV GRLHLIANDL DYLELAQLRW EALAGDAQAA
VARLRAAAEF ADHDGRHRRA MKLRLLCALA YQRAGEPAAA QAILAPVLKA ACAEGFARLL
LDEGGNRIGP LLAQFSRTLE SSGGAQRDPV LAEFVMRLVQ ACGPLEESPE PIAGDRPQLL
DPLTPKEIRV LQLLAEGYSN SAIAEKLFVS DSTVRTHLRN INNKICAHSR TQAVAIARRL
GVIA
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