Gene Rmet_5430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5430 
Symbol 
ID4042291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2176193 
End bp2177122 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID637980848 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_587558 
Protein GI94314349 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAA ATCAACCTCC GCCGCGGAGG GTGCTGTCCA CTCTCATCCG GCTGATTGCC 
GCCGTGCCGC TACCGATTGC GCACGCTACA GGCCGCGTTC TGGGGCGGCT CGTCTATGCC
CTCCCGGGGC GATACCGACA GCACGTGCAG CAGAATGCCG CCCAGGCTGG CTTTTCCGAT
CCGGCATTTG CCCGGCAGGC CGCAGGCGAG ACCGGCGCCA TGATGATCGA ACTGGCACGC
GTGTGGTATC GCGGCCCGGC GTGTCGCGAT CAGGTGATTT GCGATGACTG GACGGTGATC
GAGCAGACCC TGGCGGAAGG TCGCGGACTC ATCATGCTGA CACCGCACCT TGGATGCTTC
GAACTGGCAG CCCGCTATGC CGCGGAGCGC ATCGCGCTGA CAGTCATGTT CCGACCACAC
CGCAAGCCGA TATTGCGGGA CTTGCTTGAA TCGGTACGTG CCACCTCGAG TCTGAAGACA
GTTCCCGCGA CTTCCCAAGG CGTGCGCGCG TTCGTCCGCG CGCTGCGCCA GGGTGAAGCG
ATCGGGCTAT TGCCCGATCA GGCGCCCAAG GGTGAAGGCG TGTGGGTACC GTTCTTTGGC
CGCAAGGCCT ATACGATAAC GCTGCCAGGA AAGCTCGCAG CGCAAACGGG GGCGCCGCTG
ATCGTTGCCG CGGGCGAACG CCTGCCCGGT GGGCGTGGCT GGCGCATGCA CGTGAAGCGC
CTGTCAGGAC CATTGCCGCC GACCGCCGAG GCGCAGGCAG CATGGATCAA CGCCGAACTG
GAAGAGATGA TCCGGCGCTT TCCGCTGCAG TACCTGTGGG GATACAACCG CTTCAAGGTC
CCGTCCGGCG CTCCGGCTCC CGATTCAGCC GTTGTCCCAG AACACGACGC CTCCGTTATC
CAGGGTCCGC CAGCACCTCT CGCCCCTTGA
 
Protein sequence
MHRNQPPPRR VLSTLIRLIA AVPLPIAHAT GRVLGRLVYA LPGRYRQHVQ QNAAQAGFSD 
PAFARQAAGE TGAMMIELAR VWYRGPACRD QVICDDWTVI EQTLAEGRGL IMLTPHLGCF
ELAARYAAER IALTVMFRPH RKPILRDLLE SVRATSSLKT VPATSQGVRA FVRALRQGEA
IGLLPDQAPK GEGVWVPFFG RKAYTITLPG KLAAQTGAPL IVAAGERLPG GRGWRMHVKR
LSGPLPPTAE AQAAWINAEL EEMIRRFPLQ YLWGYNRFKV PSGAPAPDSA VVPEHDASVI
QGPPAPLAP