Gene Rmet_5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5420 
Symbol 
ID4042281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2166421 
End bp2167293 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID637980838 
Producthypothetical protein 
Protein accessionYP_587548 
Protein GI94314339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.861996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTGG CCGATATCGC CGTGATGCAC GAGCGGACGT TCTCATTCCA TTGCAGCACA 
TGCGGCAAAT GCTGTAACTC GTCGCCGCTG CTGACGATGG CCGAGTTATT CCGTCATCAG
GACCGTTTTA TCGGCTGTCT GTCGTTGCGG CGGGTGCACC CGTCGCACCC GGACGCCCGT
GAGCTGGCGG CCATGCTTGG GCATGTCTTG CCCGGCGGTG ACAGTCTCAT GCTGGCGATT
CAGGGTGTCG ACTATCCATC GCTGGCCGCC TGTCCGGCAC TTGGCGATGA CAACCTCTGC
ACCATCCACG CCACGCGCCC GACCACTTGC GCCGTGGTGC CGCTCGATGC GTGGACACCC
GATGCGCTGC AGTCGGCTGT GCTGGCTAGC CGGAGAAACG GTGCGGCCTA TATCGGCGCG
GACTGTATAT CGGAAGGCAT GCGCGATGGC TATCAGGAAC TGGTGCGACA TGGGCGCATC
ACGTCGCCGG CTTACGCGGC AGCGCTGGCG CAACGGCGCG CCGTCGAAGC CGCGGAGAAG
GCGGAGTGGG GCAACGCAGT GTTCCGGCTC CTGTTGCCGG AACTGCTGGC CGCGCCCGGC
GGCATCGCTG CCCTGCCCGT GGAGGGGTAT CGCACGCTGG CGTTGGCACC GGTGTTAGCC
GTGATCGCCG CGGGCTCCGA GCCGGATCGT TTGCGCTGCC TGGCGTTCAT CGACGCGCAG
GTCGCGCTGA TTCGCCGCCA CGCCGCGGCG GCCATCGCAC GGAAACAACC TGTCGACCGC
CCGGTCACCG CCACGTTGCG CGGCTTCGAG GCGGTGTTGC TGAGTCTGGC GGTCAGGTTG
CGAGAGGGGC AAGCCGTGAC GATCACGACT TGA
 
Protein sequence
MKLADIAVMH ERTFSFHCST CGKCCNSSPL LTMAELFRHQ DRFIGCLSLR RVHPSHPDAR 
ELAAMLGHVL PGGDSLMLAI QGVDYPSLAA CPALGDDNLC TIHATRPTTC AVVPLDAWTP
DALQSAVLAS RRNGAAYIGA DCISEGMRDG YQELVRHGRI TSPAYAAALA QRRAVEAAEK
AEWGNAVFRL LLPELLAAPG GIAALPVEGY RTLALAPVLA VIAAGSEPDR LRCLAFIDAQ
VALIRRHAAA AIARKQPVDR PVTATLRGFE AVLLSLAVRL REGQAVTITT