| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5418 |
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| Symbol | |
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| ID | 4042279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2163893 |
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| End bp | 2165197 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980836 |
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| Product | major facilitator protein family permease |
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| Protein accession | YP_587546 |
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| Protein GI | 94314337 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.540224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.639977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAG CCACCGTTTC GCTGGGCAGC GATGCCGCAG CCCGCGTCGT CGCGCCCGCT
TCCAGCACGC AGGGCCGCCG CGCCGTCATC GCGGCTGCCA TCGGCAATGG ACTGGAGATC
TACGACTTCA CGGTCTACAG CTTCTTCGCT GCCACCATCG GCCGGCTGTT CTTTCCCGCC
AGCAGTCCGC TCGCCTCGTT GCTGCTTTCC TTTGCGACGT TCGGTGCTGG CTTCGTGATG
CGCCCGCTCG GCGCCGTGCT CATCGGCAAC ATGGCCGACC GGCGGGGCCG CAAGGCCGCG
CTGACGCTGA CGATCGGCCT GATGACCGCC GGCACGGCGC TGCTGGCCTT CACGCCGTCC
TACGCCAGCA TCGGCGTGAC CGCCACTGCG CTGGTGGTGG TGGGCCGTCT GCTGCAGGGC
CTGTCCGCTG GCGGCGAGGT TGGCGCCGCG TCCGCGCTGC TGATGGAGTC GACTGGCAAG
CAACGGCGCT GCTTCGCGGT GAGCTGGCAA GGCGCAAGCC AGGGCGCTGC GGCATTGCTG
GGGGCGCTGA CCGGCGCCGC GGTGTCGGCG CTGCTGAGCC CCGAAGCACT CCAGTCATGG
GGCTGGCGCG TGCCGTTCAT GCTCGGCCTG CTGATCGCCC CGGTCGGCAT CTACATCCGC
CGGCATCTCG AAGAGACCCA AACCGAAAAC ACCGCCCACG CCGGCCTCAT GACGGTGGTG
CGCGAGCATC GCCGCACGCT GATTCTCGGC GTGCTGCTGA TGACGAGCAG CACGTCGTCG
ATGTACATCA TGGTGTTCTA CATGCCGACC TATCTGGTCA ACACCGTGCA CATGCCGCCC
GTGACCGCGT TCCTGGGCGC CTGCGTGGCA GGTCTGACGA TGCTGGTCAT GTCGCCGCTG
TTCGGATTGC TCGCGGACCG GCTGCCGCGC CGCAAGCCGC TGCTGATCGC CAACAGCATT
GTCGCCATCA GCGTGATGGT GCCCAACTTC GCGCTGCTGT CTTCTGGCCC GGGGCTGCCA
TTGACGCTGG CCTGCATCGC GTTATCGGTC ACGTTGAGTT CCGTAGGCGG CGGCGCGGGA
TCGGCGCTGA TGATGGAATC GCTGCCGCGC CATCACCGCG CCACCGGTAT GTCGATCATG
TACAGCGTGG GCGTGACCGT TTTTGGCGGC TTCGCGCCGC TGGTGGTCAC GTGGCTGATC
GCTACCACCG GTAGCCGCAT GGCGCCGGTC GGATACATGC TGTGCGCGTC GCTGATCAGC
TTTACTGCCC TTCTGCTGTT CCCCAGCCAT CCGGGCCGCG ATTGA
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| Protein sequence | MNEATVSLGS DAAARVVAPA SSTQGRRAVI AAAIGNGLEI YDFTVYSFFA ATIGRLFFPA
SSPLASLLLS FATFGAGFVM RPLGAVLIGN MADRRGRKAA LTLTIGLMTA GTALLAFTPS
YASIGVTATA LVVVGRLLQG LSAGGEVGAA SALLMESTGK QRRCFAVSWQ GASQGAAALL
GALTGAAVSA LLSPEALQSW GWRVPFMLGL LIAPVGIYIR RHLEETQTEN TAHAGLMTVV
REHRRTLILG VLLMTSSTSS MYIMVFYMPT YLVNTVHMPP VTAFLGACVA GLTMLVMSPL
FGLLADRLPR RKPLLIANSI VAISVMVPNF ALLSSGPGLP LTLACIALSV TLSSVGGGAG
SALMMESLPR HHRATGMSIM YSVGVTVFGG FAPLVVTWLI ATTGSRMAPV GYMLCASLIS
FTALLLFPSH PGRD
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