| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5412 |
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| Symbol | |
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| ID | 4042273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2154520 |
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| End bp | 2155158 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980830 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_587540 |
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| Protein GI | 94314331 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00435132 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.234222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCAA ACGAGACGGG CGACGTTGTC GCCATTCCGA ATGGGACAAC GAAATACCGC
CGGGGCCTCG AGACCCGCAA TCGCGTCATT GCGCTCACGA AGTCATTGAT TTCCGAGCAC
GGCTATAGCG AAGTGACGCT CGATCAGATC TCTGCCCAGG TCGGCGTGGC CAAGAGCAGC
CTGCTTTGGC ATTTCGGCAG CAAGGAAATG CTGCTTGCCG AGGCGGCGAT CAGTCTGTTC
CAGGAAATCG AGCTTGCGCT GCGTCCCGAC GATCTGGAGG GAAGGCCGCT GGCCGAGCGC
GTCGACGAGA TCTTTGACCG GGTGGCCGAC TATTTCACGC GCAATCCGGA AACCAAGGGG
GTGGTGATGG CGCTGCTGTT CTCCGCCAAC ACCCCCCAGT CCGTGCGCGA ACATATCCGC
GAAGGGTGGA ACGGCCATGT CCGCGTGCTG GTAGAGGCGT TGGGCACGCC GGAGCGCCCG
CTTTCTCCCG ACGCCGCCCG CCTGCTGGTG GCCATCTTCC ACGGCGCGTA CTGTCACTGG
TACGCCAACG GCCGCACGCA GCCGATTGGC GACTACCTGC ACCCGGCACG GGACCTGTTC
CTGAACTGGA TCTCGGCGGA GAACGCATCC CGGCGTTGA
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| Protein sequence | MSANETGDVV AIPNGTTKYR RGLETRNRVI ALTKSLISEH GYSEVTLDQI SAQVGVAKSS
LLWHFGSKEM LLAEAAISLF QEIELALRPD DLEGRPLAER VDEIFDRVAD YFTRNPETKG
VVMALLFSAN TPQSVREHIR EGWNGHVRVL VEALGTPERP LSPDAARLLV AIFHGAYCHW
YANGRTQPIG DYLHPARDLF LNWISAENAS RR
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