Gene Rmet_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5403 
Symbol 
ID4042264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2132781 
End bp2134193 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID637980821 
Producthypothetical protein 
Protein accessionYP_587531 
Protein GI94314322 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA TCCGCACCCT GGCAGAACGG CAGGCGATCG GACGTGAAGC ACGCAGCCGC 
GCAAAGCGAT CATCGAATGC CGAGATCGGC AACACCGACC GTGATCCGGT GGCGTTGCTG
GAGCAGAACA GCGCGGGGCG CGTGGAGGCG CTGGTGCCGC TGCGCTATGG GCGCATGTCG
GTGTCGCCAT TCACGTTCTT TCGTGGCAGC GCGATTCTCC AGGCGCACGA TCTTGCCGCC
ACGGCAAATG CAGGCATCGC ATTCCCAATC TGCGGCGACG CGCACCTGAT GAACTTCGGG
GGCTTCGCTA CGCCGGAGCG GCAGCTTGTC TTCGATCTGA ACGATTTTGA CGAAGTGGCC
GTGGGCCCCT GGGAGTGGGA CGTCAAGCGC CTTGCCGGAA GCCTGGCCAT TGCTGGCGAG
CATATGGGTA TCGCCCGGGA CACCGTCAGC GACATCGTGG CGACGGCTGT GCACGAATAC
CGCGATCGCA TGGAGGAATA CGCCGGGTAT AGCGCGCTGG ATCTCTGGAA CGAGATTGTC
TCGTTCGAAC GCATGCTCGA AGCCGCGACG AGCGAAGAGG GCCGTCGAAC GATTCTCAAG
GCGAAGGAGA AGGCCGCAGG GCGGACCAAC GAAAGCATGT TGAACAAGAT GGCCGCGCAG
CGTGACGGCC AATGGTGGAT TCAGGACGCG CCGCCGGCGA TCTTTCATCC CAGTGGCCCC
ACTTCGCTGC TTGGTGAGCA CGACCAATGG TCCAACACCG AGGCGTGGCG AGGCAAGCTG
GCCCGCGCGT TCGACGGGTA TCTGAAAACG CTTCCCTCGG AGCGACGCGC ACTGATCGAT
CACTTTTCCC TGCAGGACGT TGCCTTCAAG GTGGTAGGTG TTGGCAGTGT GGGTACCTTC
TGCCTGGTGC TGTTGATGGT GGATAGCCAC GAGCAGCCGC TGTTCCTGCA GGTCAAGGAA
GCGAGGGACT CCGTGATCGC GCTTCACTAT GACGCCGAAG GTCCGGCGCA TCAGGGTCAG
CGTGTCGTTT CGGGTCAGCG CCTGCTGCAG GCGGCCAGCG ATGCGTTCCT TGGCTGGACG
TCTGGCCCGG CCAATCGGCA GTTCTATTTC CGTCAGTTAC GCGACATGAA GGTATCGGCC
GACGTCGAAC GCATGAGCAA CGGAGTACTG CAGGGATATG CGCGCTTCTG CGGTTGGGCG
CTGGCGCGCG CGCACGCAAA GGCAAGCGGG AAGGCAGTGG AGATCGCGGC CTACCTGGGC
AGCGGGGAGC GGTTCGCCGA TGCGATCACC GAATACTCGT TCGCCTGCGC CACTCAGAAT
CTGAAGGACT ACGAGGCGTT CAAGCTCGCG TGTCGGACGG GCAAGATCGA AGCCCGCAGT
GACGAAGACA TGGCGGCGGA TTTCCGCATG TAG
 
Protein sequence
MADIRTLAER QAIGREARSR AKRSSNAEIG NTDRDPVALL EQNSAGRVEA LVPLRYGRMS 
VSPFTFFRGS AILQAHDLAA TANAGIAFPI CGDAHLMNFG GFATPERQLV FDLNDFDEVA
VGPWEWDVKR LAGSLAIAGE HMGIARDTVS DIVATAVHEY RDRMEEYAGY SALDLWNEIV
SFERMLEAAT SEEGRRTILK AKEKAAGRTN ESMLNKMAAQ RDGQWWIQDA PPAIFHPSGP
TSLLGEHDQW SNTEAWRGKL ARAFDGYLKT LPSERRALID HFSLQDVAFK VVGVGSVGTF
CLVLLMVDSH EQPLFLQVKE ARDSVIALHY DAEGPAHQGQ RVVSGQRLLQ AASDAFLGWT
SGPANRQFYF RQLRDMKVSA DVERMSNGVL QGYARFCGWA LARAHAKASG KAVEIAAYLG
SGERFADAIT EYSFACATQN LKDYEAFKLA CRTGKIEARS DEDMAADFRM