| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5395 |
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| Symbol | |
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| ID | 4042256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2120728 |
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| End bp | 2122353 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980813 |
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| Product | hypothetical protein |
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| Protein accession | YP_587523 |
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| Protein GI | 94314314 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.407079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCTG TTCCGCAGAT GAAAGCGCGA TCCCGTCTGA CCAGCAAGGT GCGCATCGCC
GCGATCGTGC TGGTCGTGCT TGGCGTGGCG CTACTGGCGC TGCGCGCCTA TGACGCGACA
CGAGGGCCGG AGCTGCAGCT CTGGCACACC TTTGTGCCCG ACGAGCTTGG TGTCGAGCAG
ATCGACCGGT CCGACTGGAG CCGCTATCTG AGGCAGGAAG ACGCCCTGTT CGAGCAGGTC
AGGCGGCACG TCAGCGACCG TCTGCCATCT GCGGCGCGGA TCCCTTCGAA CCGCTATTTC
GAGGGCAGCC CGATCTACCC GGGACGCTTC GAGCACGACT GGAACCGTTC GTACGAAATG
CGTCCAGCCG GAAAGCCCGT GGGCGCGGTC GTCCTGCTGC ATGGCCTGAC CGATTCGCCG
TACAGCCTGC GACATATCGC CCAACGGTAT GTGGAGGACG GCTTCGTCGC GGTCGGCATT
CGCCTTCCCG GCCATGGCAC GGTACCGGCC GGGCTCTCTG ACGTCGAATG GGAGCGCTGG
ATGGCGGCGA CGCGGCTTGC CGTGCGCGAG GCGCGGCTTC AGGCCGGCGC GGATCGTCCG
ATCCATCTGG TTGGCTTTTC CAATGGTGGC GCGCTGGCGA TGAAGTACGC GCTCGATAGC
CTTGAAGACC CCAGGCTGGA GCGGCCGGCC CGGATCATCC TGATCTCGCC GATGATCGGC
GTGACCCGCT ATGCGCGGTT CGCCGGGCTG GCCGCGCTGC CGGCGTTGCT GCCGCCCTTC
GAGAAGGCTG CGTGGCTCGG GATCGTGCCC GAGTTCAATC CATTCAAGTA CAACTCGTTT
CCCGTCAACG GGGCGCGGCA ATCCCATCGG CTGACCGTCG CGTTGCAAGA CCAGATTGCG
CGTGTCGCGC GGGAGCGCGG GCTGGAGGGC CTGCCTCCCG TGCTGACTTT TCAGTCGGTG
ATCGACTTCA CGGTGAGCAC TCCGGCAATC GTCAGACGGC TTTACGCGAG CCTGCCGGAC
AACGGCAGTG AACTGGTGCT ATTTGACGTC AACCGGCGTG CCAAGCTTGG GCCCCTGATC
GATCCGGCTT CAACGCAGGC GCTTGCCCGG CTCTTGCCCG CGCTGCCGGT GAGCTACAGG
CTGACGATGA TCGGCAATGA AGCGGAGGGG GCGGACGACG TGACAGCGCG CGTGGTGGAC
GCAGGCGCCA CGGAGGAGAC AAAGCAGCCA GTCGCGATGA CTTACCCGGC GCAGGTATTT
TCGCTGTCAC ACGTGGCGAT CCCGTTCCCG ATGGACGATG AGCTATACGG GATACAACCC
ATGGATGCGG GGAATCCGCG CTTCGGCGTG TCGCTTGGCG CGATCGCACC GCGTGGTGAA
CGCGGCGCAT TGATGGTCAG CCTCGATTCG ATGTTCCGGA TCTCTTCCAA TCCGTTCTTC
CCGTACCTGC TTGCGCGCAT CGACGAGGTG ATCGCCAAAC CGGCCCGCGC GTCGGGTGCC
CGGCCAGGTG GTGCTCGCCG CGCGGGGCCT GCGGCGGAAG CGAGTTTTCC GGATACCGAC
CCCGAGTTCG ATGAGATGCT GCGCAAGGCG CAGGACGTGG AGCTTGATTC AGTGGTGATG
CCGTAG
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| Protein sequence | MGPVPQMKAR SRLTSKVRIA AIVLVVLGVA LLALRAYDAT RGPELQLWHT FVPDELGVEQ
IDRSDWSRYL RQEDALFEQV RRHVSDRLPS AARIPSNRYF EGSPIYPGRF EHDWNRSYEM
RPAGKPVGAV VLLHGLTDSP YSLRHIAQRY VEDGFVAVGI RLPGHGTVPA GLSDVEWERW
MAATRLAVRE ARLQAGADRP IHLVGFSNGG ALAMKYALDS LEDPRLERPA RIILISPMIG
VTRYARFAGL AALPALLPPF EKAAWLGIVP EFNPFKYNSF PVNGARQSHR LTVALQDQIA
RVARERGLEG LPPVLTFQSV IDFTVSTPAI VRRLYASLPD NGSELVLFDV NRRAKLGPLI
DPASTQALAR LLPALPVSYR LTMIGNEAEG ADDVTARVVD AGATEETKQP VAMTYPAQVF
SLSHVAIPFP MDDELYGIQP MDAGNPRFGV SLGAIAPRGE RGALMVSLDS MFRISSNPFF
PYLLARIDEV IAKPARASGA RPGGARRAGP AAEASFPDTD PEFDEMLRKA QDVELDSVVM
P
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