| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5392 |
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| Symbol | |
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| ID | 4042253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2117889 |
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| End bp | 2118548 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980810 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | YP_587520 |
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| Protein GI | 94314311 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.890679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTC TTCTCATCGA GGATGAACCG TGGCTTGGGC AGGCCGTCCG CGACCAGATC
GAAAAGGACG GGCATCCGAC CGACTTCGTG GCCAATCTCG CCGATGCGCG CCGACATCTT
GCGGCCGCAA CCTACGACCT GATCCTGCTA GACCTGCTGC TGCCCGATGG CCGCGGCCTT
GATTTCCTGC GTGAACTGCG CGCGAGCGGA TCGAACGTGC CCATCATCAT CCTGACCGCG
CTCGATCAGG TGTCGAATCG CATTGCCGGT CTGAACGCCG GCGCGGATGA CTACCTGGTC
AAGCCGTTCG ACCTGTCCGA ACTGTCCGCG CGCGTCAGCG CGGTGGCGCG TCGGTACGCG
GGTAATCCGA ATCCATTGGT GAATCTTGGC GACCTACGCA TCGACACGGC CGGGCATAGC
GTGATGCGCG GCGAAACCCG CGTCGACCTG ACGGCCAGCG AATGGGCGCT GCTTGAGGCA
CTGATCCAGC ATCCGGGCAT GATCGTGTCG CGGGCAAGGC TCGAGGAACG GCTTTACTCC
TTCAACGAGG AAGTCGGCAG CAACACCATC GAGGTCCATA TGAGCCGGCT GCGCAAGAAA
CTTGGCGCGG ATGTCATCGA GACCTTGCGC GGGCTAGGCT ATCGACTCAG GCGGGACTGA
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| Protein sequence | MRVLLIEDEP WLGQAVRDQI EKDGHPTDFV ANLADARRHL AAATYDLILL DLLLPDGRGL
DFLRELRASG SNVPIIILTA LDQVSNRIAG LNAGADDYLV KPFDLSELSA RVSAVARRYA
GNPNPLVNLG DLRIDTAGHS VMRGETRVDL TASEWALLEA LIQHPGMIVS RARLEERLYS
FNEEVGSNTI EVHMSRLRKK LGADVIETLR GLGYRLRRD
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