| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5388 |
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| Symbol | apbE |
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| ID | 4042249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2113516 |
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| End bp | 2114505 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637980806 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_587516 |
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| Protein GI | 94314307 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGGA CGTCTACTAA TCGGTCAGAC ACGGCGCTCG AACTCTGTCG CGTCAGCGGC
GCGACCATGG GCACCCGCTA CACGGCGGCA TACTACGCGC CGCCGGGCAT GGATGAAGCG
GTGCTGGCGG AACGACTCGC CCTGGCGGTC GGCGCCGTGG ATGCGCAGAT GTCGAACTGG
AAGGCAGACT CGGATCTGTC CCGACTGAAC CGTGCTGCGC CGGGCGGTTG GGTGCCGGTC
TCCAGGAACC TCGCAACCCT GCTTGCGCGG GCGCTGAAGA TCGGCAGTGA TACGCACAAC
GCGTTCAACA TCGGCGTCGG CGATCTGGTC GACCGGTGGG GGTTCGGACC GTCCGGGGCG
CAATGCGTTT CGCATCCAGA TCTCGGTGAG GCGGCCGGCG CAAGTCCCCG CCAGCCAGCA
GGAGAACTGA TCGAGGTGGA TGAGCGGCTG TGCCGCGTGC GCAAGCTCGG CCCGGTCGTG
CTCGATCTGT GTGGCATCGC CAAGGGGTTT GGCGTCGATG AACTCGGGCG TGTGCTGAGC
GAGCACGGTA TCGAATCCTG GCTGGTCGGC ATCGACGGCG AGATGCGCGC GCGTGGGAAT
AAGCCAGATG GCGGGCCGTG GGCGATCGCC CTCGAGGCCC CGGACTATGA GCGCCGCGCG
GCGATGGGCG TGATCGAACT GGCAGATGCC GCCATTGCCA CGTCCGGCGA TTACCGGCGC
TGGGCCGATG TCGGCGGCGC GCGCATTTCG CACACGATGG ACCCGCGTAC CGGTGCGCCG
CTGGCGGGTG GGATGGCATC GGTCACGGTG GTGGCGAAGA CCTGCGCGGA TGCCGATGCC
TATGCGACGG CGCTGATGGT GCTCGGCGCG CAGGCTGGGC CGGACTACGC GCGGCAGCGC
GGCCTCGACG TCCTCTTCAT CGTGCGCGAT GGCGAGGCGC TGCGCACGAT CGGAACCGGA
TGCTTTGCGG ACGAGGCGCC GTCAAGCTGA
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| Protein sequence | MSRTSTNRSD TALELCRVSG ATMGTRYTAA YYAPPGMDEA VLAERLALAV GAVDAQMSNW
KADSDLSRLN RAAPGGWVPV SRNLATLLAR ALKIGSDTHN AFNIGVGDLV DRWGFGPSGA
QCVSHPDLGE AAGASPRQPA GELIEVDERL CRVRKLGPVV LDLCGIAKGF GVDELGRVLS
EHGIESWLVG IDGEMRARGN KPDGGPWAIA LEAPDYERRA AMGVIELADA AIATSGDYRR
WADVGGARIS HTMDPRTGAP LAGGMASVTV VAKTCADADA YATALMVLGA QAGPDYARQR
GLDVLFIVRD GEALRTIGTG CFADEAPSS
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