Gene Rmet_5383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5383 
Symbol 
ID4042244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2109598 
End bp2110404 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content69% 
IMG OID637980801 
ProductIclR family transcriptional regulator family 
Protein accessionYP_587511 
Protein GI94314302 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.388953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC GCACTGCGAA TCGAAACGTC CGGCAGACGG ACGTTTCATC TTCGACCTCC 
GAGGAAGGCA CCCGCGCCTT ACGACGCGGC CTGACGCTGC TCGACGCCAT CCTGGCAGCC
GGTAAGGATG GTCTCCGGGT GATCGACATG TGCCGCGCGG CCGGCCTGGA GCGGCCCACG
GTCTACCGCT TGCTGGCGGC CCTGATCGAC TGTGGATATG TGGTCCAGCA CGGGAGATTT
CGCTATGTGC GCGGTCCGCG TCTGGCGGCA ATGCCACAGC GTGGGGAATC GACGGACCTT
TCTGGAAAGC TGGGCCCGGT GCTCACGCGG GTGAGCCAGG CGTGCGGCGA TGCCGCCTTC
TGCGTGGTTC GCGATGGCGC GTTGTCGCGC TGCATCGCGC GCCACGTGGG CACCCATCCC
GTGCAGGTGC TGGTCATCCA GGTGGGCACC CGGCAACCGC TGGGCGTTGG CGCAGCGGGG
CTGGCGCTGC TGGCAGCACT GCCCGATGCC ACCGTCGACG AGGTGATCGC CACCAATGCA
GGCGTGCTGG ACCAGTACGG CGGCATGACG CCCGACCGGA TGCGCATCCT GATCCGCGCC
ACGCGCGAAC GCGGCTACTC GGTGATCGGC AATCACGCCA CGCGCGGCGC ACTGGCCGTG
GGCATGGCCG TGCACGATCG CGATGGCGAG CCCGTGGCTG GCATCAGCGT GGCCACCACG
CTTGCGCGAA TGCCGCGCGA GCGGCAGCAG TTGCTGGCTC GGGTGATGCG CGAAGCAGTG
GCGGCGTTGC TGCCGTGTGG CCTGTAG
 
Protein sequence
MTSRTANRNV RQTDVSSSTS EEGTRALRRG LTLLDAILAA GKDGLRVIDM CRAAGLERPT 
VYRLLAALID CGYVVQHGRF RYVRGPRLAA MPQRGESTDL SGKLGPVLTR VSQACGDAAF
CVVRDGALSR CIARHVGTHP VQVLVIQVGT RQPLGVGAAG LALLAALPDA TVDEVIATNA
GVLDQYGGMT PDRMRILIRA TRERGYSVIG NHATRGALAV GMAVHDRDGE PVAGISVATT
LARMPRERQQ LLARVMREAV AALLPCGL