Gene Rmet_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5378 
SymbolhmuV 
ID4042239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2104505 
End bp2105290 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID637980796 
Producthemin importer ATP-binding subunit 
Protein accessionYP_587506 
Protein GI94314297 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.124371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTG CCCGCAATCT TTCATGCAGC CGCGGTCGGC GGCAGATCCT GTCCGGTATC 
GACCTGACCC TGCCGGCCGG CGAGATGGTC GGCGTGCTCG GTGCCAACGG CGCCGGCAAG
AGCACGCTGC TCGGCACGCT GGCAGGTGAA CTGCCCGGCG ACGACGCGGC GGTGTCGCTC
TGCAACCGGC CATTGACGGA CTGGCCCGTG GACGAGCTCG CCCGTAGCCG TGCGGTGCTG
CCGCAATCGC CCGGTCTGGG CTTCGACCTG GGTGTGACCG AGGTGGTGGC GATGGGCGGC
TATCCATTTC CAGAGATGGG CAAGCACACG CTCGATACCC TGCTGGACCG CGCCCTGGCG
CTGGCCGACG TCGCGCATCT GGCCACGCGT TCGTACCAGA GCCTATCCGG CGGCGAACAG
CAGCGCGTGC AGTTCGCTCG CGCGCTGGTG CAGGTGCTGG CCTGCCGCAC GGCCGACAGC
TACCGCGCGC TACTGCTCGA TGAACCGATT TCGAGCCTCG ACCCCCGGCA TCAGTTGCAA
CTGCTCGGCA CGGCGCGCAA CCTGTGCCAT ACCGACGCCC TGGCGGTGCT GGTCGTGCTC
CACGACGTCA ATCTCGCCGC CCGCTGGTGC GACAGGCTCG TGCTGCTGGC CGATGGCCGT
ACCGTGGCCA GCGGCACCCC CGCCGACGTG CTGACCCCGC CGAACCTCGC CACGGTGTAC
GGCATTCCAG CCACCGTCAT GGAATCGCCA GTTCACCGGG GCGTGCCGAT GGTGGTGTTT
GGCTGA
 
Protein sequence
MLIARNLSCS RGRRQILSGI DLTLPAGEMV GVLGANGAGK STLLGTLAGE LPGDDAAVSL 
CNRPLTDWPV DELARSRAVL PQSPGLGFDL GVTEVVAMGG YPFPEMGKHT LDTLLDRALA
LADVAHLATR SYQSLSGGEQ QRVQFARALV QVLACRTADS YRALLLDEPI SSLDPRHQLQ
LLGTARNLCH TDALAVLVVL HDVNLAARWC DRLVLLADGR TVASGTPADV LTPPNLATVY
GIPATVMESP VHRGVPMVVF G