| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5371 |
|---|
| Symbol | katG |
|---|
| ID | 4042232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 2094936 |
|---|
| End bp | 2097116 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637980789 |
|---|
| Product | catalase/hydroperoxidase HPI(I) |
|---|
| Protein accession | YP_587499 |
|---|
| Protein GI | 94314290 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0849549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG AAGCAAAGTG CCCTTTTCTA CATCCCGCCG GCGCTGGCCG GGCGCTCCAG
GAATGGTGGC CCGAGCGCCT GAATCTGCAT ATCCTGCGCC AGAACGCTCC GTTGTCCGAT
CCGATGGGAG AGGCTTTCGA TTATGCGAAG GCGTTTAACA GTCTCGACCT CGCGGCGGTC
AAGAAGGATC TGGAAGCGCT GATGACCGAT TCGCAGTCCT GGTGGCCGGC GGATTTCGGG
CACTACGGCC CGTTGTTCGT CCGGATGGCC TGGCACGCGG CAGGTACCTA CCGCATCGGC
GATGGGCGTG GCGGTGCCGG CGCTGGCCAG CAGCGTTTCG CGCCCACCAA CAGCTGGCCG
GACAACGTCA GTCTGGACAA GGCACGCAGG CTCATCTGGC CGATCAAGCA GAAATACGGC
CGCAAGATCT CGTGGGCCGA CCTGATCGTT CTGACGGGCA ATGTTGCCCT GGAGTCGATG
GGGTTCAAGA CCTTCGGATT CGGCGGCGGA CGCGAGGATG TCTATGAGCC GGACGAGTCC
GTCTACTGGG GCAATGAAGC CGAGTGGCTG GCGGACAAGC GTTACAGCGG TAACCGGAAC
CTCGAGAATC CGCTGGCTGC GGTGCAGATG GGCCTGATCT ATGTAAATCC GGAAGGCCCC
AATGGCAACC CGGACCCGGT TGCCGCCGCC ATCGACATCC GCGAGACGTT CCGCCGCATG
GCCATGAACG ACGAAGAAAC CGTCGCGCTG ATCGCGGGCG GTCATGCCTT CGGCAAGACG
CATGGCGCCG GCCCCGCATC GCACGTGGGG CCCGAGCCTG AAGCCGCGGG CCTCGAGGAG
CAGGGCCTTG GCTGGCGCAG CAGCTTTGGC ACCGGCAAGG GCGGTGATGC CATCGGCAGT
GGCCTGGAGG TCATCTGGAC CACCACGCCG ACGAAGTGGA GCAACGACTT CTTCAAGCAC
CTGTTCGAGT ACGAATGGGA ATTGACGAAG AGCCCCGCGG GCGCACATCA ATGGAAGCCA
AAGGGCAATG CCGGCGCCGG CACCGTGCCC GACCCTGCCG ACCCGTCGAA GCGCCGTTCG
CCCTCGATGC TGACGACCGA TCTGTCGCTG CGCTTCGATT CGATCTACGG CAAGATTTCG
CGCCGGTACT ACGATCATCC CGATGAGCTG GCCGACGCAT TCGCACGGGC GTGGTTCAAG
CTGACCCATC GCGACATGGG GCCGCGCGCG CGCTACCTTG GCCCGGAAGT CCCGAAGGAG
GAACTCCTGT GGCAAGACCC CATCCCGCCG GTTGATCATC CGCTGATCGA CGCGAAGGAT
GTCGCCGCGC TCAAGGCCAA GGTGCAGGCT TCGGGGCTGA CCGTGCCGCA ACTGGTTTCG
ACGGCGTGGG CGTCGGCTTC GACGTTCCGT GGCTCGGACA AGCGCGGTGG CGCCAACGGC
GCGCGCATCC GCCTGGCCCC GCAGAAGGAC TGGGACGTCA ATCAGCCTGC CGAACTGGCG
AAGGTGCTGG TCAAGCTGGA GAGCATCCAG AGCGAGTTCA ACAAGGCGCA GAGCGGTGGC
AAGAAGGTCT CGATGGCTGA CCTGATCGTG CTGGCCGGAT GCGCGGGCGT CGAGCAGGCG
GCAAAGAGCG CCGGGCAGGA TGTGACGGTG CCGTTCTCGC CGGGACGCAT GGACACTACG
CAGGAGAAAA CGGACCTGGA TGCGATGGTG GTGCTGGAAC CCATCGCAGA TGGTTTCCGC
AACTACCTGC AGGGCAAGTT CTCGGTCCGG GCCGAGGCCT TGCTGGTGGA CAAGGCGCAA
CTGCTGAAGC TGACCGTGCC GGAGATGACG GCGCTTGTCG GTGGACTGCG GGTGCTGGGC
GCCAACTTCG GCAACTCGCA GCACGGCGTC TTCACGAAAC GCCCTGGCAC GCTGACCAAC
GACTTCTTCG TGAACCTGCT CGACATGGGC ACGGAGTGGA AGCCAGTGTC GGAGGAAAGA
GAGGTGTTCG AGGGCAGCGA CCGGGCGACG GGCACGCCAA GATGGACCGG CACGCGCGTC
GATCTGGTCT TCGGCTCGAA CTCCGAGCTG CGGGCGGTTG CCGAGGTCTA TGGTGCGGCG
GACGCGCAGG AGAAGTTCGT GCAGGACTTC GTGGCGGCGT GGAGCAAGGT GATGAACCTG
GACCGCTTCG ATCTCAAGTG A
|
|---|
| Protein sequence | MTTEAKCPFL HPAGAGRALQ EWWPERLNLH ILRQNAPLSD PMGEAFDYAK AFNSLDLAAV
KKDLEALMTD SQSWWPADFG HYGPLFVRMA WHAAGTYRIG DGRGGAGAGQ QRFAPTNSWP
DNVSLDKARR LIWPIKQKYG RKISWADLIV LTGNVALESM GFKTFGFGGG REDVYEPDES
VYWGNEAEWL ADKRYSGNRN LENPLAAVQM GLIYVNPEGP NGNPDPVAAA IDIRETFRRM
AMNDEETVAL IAGGHAFGKT HGAGPASHVG PEPEAAGLEE QGLGWRSSFG TGKGGDAIGS
GLEVIWTTTP TKWSNDFFKH LFEYEWELTK SPAGAHQWKP KGNAGAGTVP DPADPSKRRS
PSMLTTDLSL RFDSIYGKIS RRYYDHPDEL ADAFARAWFK LTHRDMGPRA RYLGPEVPKE
ELLWQDPIPP VDHPLIDAKD VAALKAKVQA SGLTVPQLVS TAWASASTFR GSDKRGGANG
ARIRLAPQKD WDVNQPAELA KVLVKLESIQ SEFNKAQSGG KKVSMADLIV LAGCAGVEQA
AKSAGQDVTV PFSPGRMDTT QEKTDLDAMV VLEPIADGFR NYLQGKFSVR AEALLVDKAQ
LLKLTVPEMT ALVGGLRVLG ANFGNSQHGV FTKRPGTLTN DFFVNLLDMG TEWKPVSEER
EVFEGSDRAT GTPRWTGTRV DLVFGSNSEL RAVAEVYGAA DAQEKFVQDF VAAWSKVMNL
DRFDLK
|
|---|
| |