Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5361 |
Symbol | |
ID | 4042222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2082483 |
End bp | 2083304 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637980779 |
Product | putative enoyl-CoA hydratase/isomerase |
Protein accession | YP_587489 |
Protein GI | 94314280 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00524739 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCC CTAACGCTTC GTCTACCGCT TCCTCTACCG TCTCCTCTAC CAACGGCCAG GATTCCCTTC AGGTCACGCG CGACGGACAT GTCGTCCAGG TCCTGATTCG CAGGCCGCCC CATAACCACC TCGACCCGGC ATTCGTCGGC CTGCTGGCGG ACACGCTCGA ACAACTCGAT GGCGACGACG AATGCCGCGC CATCGTGCTG GCGGCCGAAG GCAAGTCCTT CTGCGCCGGC GCGGACTTCT CCGGCCAGCA AGCATCGTCA TCGGTCAGCC GCGACCCGAG CCCGTTCTAC AAGCAGGCCA TGCGGCTCTT CCGCACGCGC AAGCCGATCG TCGCCGCAGT ACACGGCGCG GCCGTGGGCG CCGGCGTAGG GTTGTCGCTC GTGGCGGACT TCCGCGTCAC CTGCCCCGAG GCGCGGTTCA GCGTCAACTT CAACCGGCTG GGTTTTCATG CCGGCTTCGG CCTGAGCCTG ACCCTGCCCC GCCTGATCGG GGTCCAGCAG GCATCGCTGC TGCTATACAC GGGGCGTCGC ATTGACGGCG AGACCGCCGT GCGCATCGGA CTGGCTGACG AACTCGTACC GGCCGACCAG GTTCTGGCCC GCGCCCATGC GCTGGCCACC GAGATCGCAA TCTCGGCCCC GCTCGCCGTG GAAAGCACGC GCGCCGCGCT GCGCGAGGGG CTGGCGGATG CGATCTACGC CGCCAACCAG AAGGAGCTGG CTATCCAGCT CACGCAATTC CCGACCGAGG ATTTTCGCGA AGGCGTGGCA GCCATGGCCG AACGCCGTCC GCCGAACTTC CGTCGTCGCT GA
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Protein sequence | MTPPNASSTA SSTVSSTNGQ DSLQVTRDGH VVQVLIRRPP HNHLDPAFVG LLADTLEQLD GDDECRAIVL AAEGKSFCAG ADFSGQQASS SVSRDPSPFY KQAMRLFRTR KPIVAAVHGA AVGAGVGLSL VADFRVTCPE ARFSVNFNRL GFHAGFGLSL TLPRLIGVQQ ASLLLYTGRR IDGETAVRIG LADELVPADQ VLARAHALAT EIAISAPLAV ESTRAALREG LADAIYAANQ KELAIQLTQF PTEDFREGVA AMAERRPPNF RRR
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