Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5355 |
Symbol | |
ID | 4042216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2076003 |
End bp | 2076908 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980773 |
Product | hypothetical protein |
Protein accession | YP_587483 |
Protein GI | 94314274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00203368 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGA CGACGCCAAT CCGCGCAACA CTTCGCCGCA CCCTGTGCAC GCTGCTGCTG GGTGCAGCCG CGAGCCTGAC ACCCGCGGCG CACGCCAACG AGGTCTTCGC CACGCCCGAG GCCGCGATGA CCGCTTTCGG CAACGCCGTC ATCAACGACG ACGAGCCGAC GCTGCAGAAA CTGTTCGGCG GCAAGTTCCG CGACATCATT CCGCCGGTGG GCGCCGAGGT CCGCAGCAAG TTCCTGACAG CCTGGGGCAA GTCCCACGCT GTCGATCAGA AAGAGAATCG CGCCTATATC GACGTGGGAG ACGACGGCTG GACCTTCCCC ATTCCACTGG TGAAGGGCAG CAAGGGCTGG CAGTTCGACA CGCTGGCCGG CGTGGAGGAA ATGCGGGTGC GCAGGGTGGG CCGCAACGAG CTGGCCGTCA TCCAGACCAT GCTGGCGATC ACCGACGCAC AGGCCGAATA CGCGCTGACG CTGCACGATG GCAGCAAGAC GCTGGTGTAC GCATCGAAGC TGTCGAGCAC GCCCGGCAAG CAGGATGGCC TCTACTGGGC CTCCGCGCCA GGCGAGCCAC AGAGCCCGCT AGGCGCTGCG TTTCGCGGCG CGGGAACAAG CCATGCCAGC AAGGATGGCT ATTACGGATA TCACTACAAG CTGCTCGACG CGCAAGGCCC CAACGCCCCG GGCGGGGCCT ACAGCTATGT GGTCAACGGC AATCTCTTCG GCGGCTTTGC CGTGCTGGCA TGGCCGGCGC GCTATCAGGA CACCGGCGTC ATGAGCTTCA TGGTCAGCCA CGACGGCCAA GTCTACGAGC GAGACCTTGG CGCCGACAGC GCGGTCAAGG CCAAGGAGAT CCGGAACTTC GATCCGGGTG CGGGATGGAG AAAGGTGGCG CCGTAG
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Protein sequence | MTLTTPIRAT LRRTLCTLLL GAAASLTPAA HANEVFATPE AAMTAFGNAV INDDEPTLQK LFGGKFRDII PPVGAEVRSK FLTAWGKSHA VDQKENRAYI DVGDDGWTFP IPLVKGSKGW QFDTLAGVEE MRVRRVGRNE LAVIQTMLAI TDAQAEYALT LHDGSKTLVY ASKLSSTPGK QDGLYWASAP GEPQSPLGAA FRGAGTSHAS KDGYYGYHYK LLDAQGPNAP GGAYSYVVNG NLFGGFAVLA WPARYQDTGV MSFMVSHDGQ VYERDLGADS AVKAKEIRNF DPGAGWRKVA P
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