Gene Rmet_5355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5355 
Symbol 
ID4042216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2076003 
End bp2076908 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID637980773 
Producthypothetical protein 
Protein accessionYP_587483 
Protein GI94314274 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00203368 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA CGACGCCAAT CCGCGCAACA CTTCGCCGCA CCCTGTGCAC GCTGCTGCTG 
GGTGCAGCCG CGAGCCTGAC ACCCGCGGCG CACGCCAACG AGGTCTTCGC CACGCCCGAG
GCCGCGATGA CCGCTTTCGG CAACGCCGTC ATCAACGACG ACGAGCCGAC GCTGCAGAAA
CTGTTCGGCG GCAAGTTCCG CGACATCATT CCGCCGGTGG GCGCCGAGGT CCGCAGCAAG
TTCCTGACAG CCTGGGGCAA GTCCCACGCT GTCGATCAGA AAGAGAATCG CGCCTATATC
GACGTGGGAG ACGACGGCTG GACCTTCCCC ATTCCACTGG TGAAGGGCAG CAAGGGCTGG
CAGTTCGACA CGCTGGCCGG CGTGGAGGAA ATGCGGGTGC GCAGGGTGGG CCGCAACGAG
CTGGCCGTCA TCCAGACCAT GCTGGCGATC ACCGACGCAC AGGCCGAATA CGCGCTGACG
CTGCACGATG GCAGCAAGAC GCTGGTGTAC GCATCGAAGC TGTCGAGCAC GCCCGGCAAG
CAGGATGGCC TCTACTGGGC CTCCGCGCCA GGCGAGCCAC AGAGCCCGCT AGGCGCTGCG
TTTCGCGGCG CGGGAACAAG CCATGCCAGC AAGGATGGCT ATTACGGATA TCACTACAAG
CTGCTCGACG CGCAAGGCCC CAACGCCCCG GGCGGGGCCT ACAGCTATGT GGTCAACGGC
AATCTCTTCG GCGGCTTTGC CGTGCTGGCA TGGCCGGCGC GCTATCAGGA CACCGGCGTC
ATGAGCTTCA TGGTCAGCCA CGACGGCCAA GTCTACGAGC GAGACCTTGG CGCCGACAGC
GCGGTCAAGG CCAAGGAGAT CCGGAACTTC GATCCGGGTG CGGGATGGAG AAAGGTGGCG
CCGTAG
 
Protein sequence
MTLTTPIRAT LRRTLCTLLL GAAASLTPAA HANEVFATPE AAMTAFGNAV INDDEPTLQK 
LFGGKFRDII PPVGAEVRSK FLTAWGKSHA VDQKENRAYI DVGDDGWTFP IPLVKGSKGW
QFDTLAGVEE MRVRRVGRNE LAVIQTMLAI TDAQAEYALT LHDGSKTLVY ASKLSSTPGK
QDGLYWASAP GEPQSPLGAA FRGAGTSHAS KDGYYGYHYK LLDAQGPNAP GGAYSYVVNG
NLFGGFAVLA WPARYQDTGV MSFMVSHDGQ VYERDLGADS AVKAKEIRNF DPGAGWRKVA
P