Gene Rmet_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5354 
Symbol 
ID4042215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2074656 
End bp2075990 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content68% 
IMG OID637980772 
Producthypothetical protein 
Protein accessionYP_587482 
Protein GI94314273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.16204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACC ATTGGATGCA ACGCTTGGCG CCCACCATCG GCGCCGCCCT GCTCGCCGGC 
ATGGCCCTCG TGGCAACCGG CGTCATGGCC CAGGAAAAGC CCGCCCCCGC TCCCGCGCCG
TTCAAGGCCG AGGAGATCGA GGCACTGGTC GCACCGATCG CGCTCTATCC CGATACCGTG
CTGTCGCAGG TGCTGATGGC GTCGACCTAT CCGCTGGAGA TCGTCTTTGC CGCCCGCTGG
GTGAAATCGC ACCCTGGCGA GAAAGGCGAT GCCGCGGTCA AAGCTGTGCA GAACGAGTCG
TGGGACGTCA GCGTGAAGTC GCTGGTGGCA TTCCCGCAGA TCCTCGAACC TATGTACGAC
AAGCTCGACT GGACCCAGAA GCTCGGTGAC GCATTCCTGG CCCAGGAGAG GGATGTGCTC
GCAGCGGTAC AGCGGCTGCG CGCGCGTGCC CGCGATGCCG GCAACCTGCA ATCGAATGAG
CAGCAACGCG TGATCGTCGA GCCGGCGACC ACGTCGGGCG CGGTGTCGCA GACCATCGTG
CGGATCGAGC CGGCCAACCC GGAGGTGATC TACGTGCCCG CCTACGACCC GGCGGTGGTC
TATGGCGGCT GGGCCTATCC CGCCTACCCC TATTACTACT GGCCACCCTA CCCGGCGTAC
TACCCGGGCT ACGCGTTTGG CAGCGGCCTG GCATTCGGGT TCGGCCTCGC CGCCGCGGCA
GCCATCTTTG GTGACTGCAA CTGGGGCGGG GGCGACGTCC ACGTCGACCA CCACAAGGCC
ACCAATATCG ACCGCAATTT CGATCGCAAT GGTCGACAAG GTGGCCAGGG CAGCAGTCGA
TGGGAGCACA GCGTCGATCA TCGCAAGGGC GTTGCCTATC GCGACAACGC TACGCGCGAA
CGTTTCGGCC GCGAGCAGGC TGGCGCCGCC GACCGGCGCG CCAACTATCG TGGCCGCGAT
CCGGGCGCCG GCAATCGCGC CGGGGTTTCC GACCGCATGG CCGGCGGCAA CCCATCAGCC
TCGGACCGCA TGAACGGGGG CAACCGCGCG GGCACGTCCG ACCGCCCCGC GACGGCGGAT
CGCGCGGCGG CCGGCAACCG GGCCGGCGCC TCCGACCGCG CACAGGCCGC CGACCGCTAC
AGCGCGGGAT TCGGCGGGCG GGACAACGGC TTCCAGGGCG TCGGCAACGG CGCCGGCACG
CAGAACAACA CCAATCGCGG CAGTTCCAGC ATGCAGTCAT CGGGCTTTAA TCGCGGCGGT
GGCGGATATT CGGGCGGCGC GCGTGGCGGT GGCGGCGGTT TCGGTGGCGG CCGCGGCGGC
GGTGGACGTC GATAA
 
Protein sequence
MIHHWMQRLA PTIGAALLAG MALVATGVMA QEKPAPAPAP FKAEEIEALV APIALYPDTV 
LSQVLMASTY PLEIVFAARW VKSHPGEKGD AAVKAVQNES WDVSVKSLVA FPQILEPMYD
KLDWTQKLGD AFLAQERDVL AAVQRLRARA RDAGNLQSNE QQRVIVEPAT TSGAVSQTIV
RIEPANPEVI YVPAYDPAVV YGGWAYPAYP YYYWPPYPAY YPGYAFGSGL AFGFGLAAAA
AIFGDCNWGG GDVHVDHHKA TNIDRNFDRN GRQGGQGSSR WEHSVDHRKG VAYRDNATRE
RFGREQAGAA DRRANYRGRD PGAGNRAGVS DRMAGGNPSA SDRMNGGNRA GTSDRPATAD
RAAAGNRAGA SDRAQAADRY SAGFGGRDNG FQGVGNGAGT QNNTNRGSSS MQSSGFNRGG
GGYSGGARGG GGGFGGGRGG GGRR