Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5346 |
Symbol | |
ID | 4042207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2065054 |
End bp | 2065965 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637980764 |
Product | hypothetical protein |
Protein accession | YP_587474 |
Protein GI | 94314265 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00567307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAC GGCCTCAACT GCACTGGTTC CGGATGCTGT TCGTCCTGCG CGGGTCCGTG CTGCCGGCAA TCGCGCCGCA ACTGCTCGGC GTCACGCTGT TCTCCGCGCT CATCACGGCG TTTCACGGGC GGATCTGGGA CTGGAAGGTA TCGCTGAATT TCGTCCCGTT CTCGCTGATC GGGCTGACGC TGGCTATCTT CCTGGGCTTT CGCAACAGCA CCAGCTATGC GCGCTACTGG GAAGGACGGA CGCTCTGGGG CAGCGTGCTG ATCGAGTCGC GGTCGCTCGT GCGGCAGGCG CTGACGCTGA CGTCGGACCC CGATGCCGCC CGGCAACTGG CCCACCGGCT CTGCGTCTTC GTGCACACGC TGCGCCACCA ATTGCGCGGC ACGGATCCGG CGGCCGACAT CGCGCCGTTC GTCGATACCG CCACCAGCCA GCGCATGCGC GATGCCCGGT TCAAACCCGC CATCGCCTTG CTGATCGCCG GCGAATGGCT GGGCGAGCAG CTACGCCTGG GAAAGCTGTC GCCGTCGCTG GCGTTGCCGA TGGAAAACGC GCTGAGCCAT CTGGGCAGCG CGCTGGGCGG ATGCGAGCGC CTTGCCAGCA CGCCGATTCC GTTCACCTAC TCCGTCATCA TCCACCGCTG CATCTATCTC TACTGCGTGC TGCTGCCGTT CGGGCTGCTC GACACGATCG GCCTGATGAC GCCAGTGATC GTCTGCTTCA TCGCCTATAC GTTCTTCGCG CTGGAAGCGC TCAGCGCGGA GATCGAGGAG CCCTTCGGCG AAGAGCCCAA CGACCTGGCG CTGGCCACCA TGTCCTACAT GATCGAATCG ACCGTGCTGG AGATGGTGGG CGAGCAGCCG CTTAGCCCCC GGCCGGTCAA CGACGGATAT ATCCAGACCT AG
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Protein sequence | MITRPQLHWF RMLFVLRGSV LPAIAPQLLG VTLFSALITA FHGRIWDWKV SLNFVPFSLI GLTLAIFLGF RNSTSYARYW EGRTLWGSVL IESRSLVRQA LTLTSDPDAA RQLAHRLCVF VHTLRHQLRG TDPAADIAPF VDTATSQRMR DARFKPAIAL LIAGEWLGEQ LRLGKLSPSL ALPMENALSH LGSALGGCER LASTPIPFTY SVIIHRCIYL YCVLLPFGLL DTIGLMTPVI VCFIAYTFFA LEALSAEIEE PFGEEPNDLA LATMSYMIES TVLEMVGEQP LSPRPVNDGY IQT
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