Gene Rmet_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5336 
Symbol 
ID4042197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2048122 
End bp2048607 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID637980754 
Producthypothetical protein 
Protein accessionYP_587464 
Protein GI94314255 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00233942 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA GCGCGGTGCC GGTATCCAAG CCGGCAGACA CCAACTTCAT CTTCGGACAG 
TCACATTTCA TCAAGACCGT CGAGGACCTG CACGAGGCAC TCGTCGGCAC GGTACCCGGC
ATCCGCTTCG GCATCGCCTT CTGTGAGGCG TCGGGCAAAC GGCTCGTGCG CTGGTCTGGC
ACTGACGAGG CGATGATCGA CCTGGCCTGC CAGAACGCCA CCGCGATCGC GGCCGGTCAT
ACCTTCCTGA TCTTTCTTGG GGGTGGGTTC TTTCCCGTCA ACGTGCTCGG CGCCGTGCGC
GCCGTGCCGG AGGTATGCCG CATTTACTGT GCCACCGCGA ACCCGACTGA GGTCATCGTC
GCGCAGACGG ATCTTGGCCG GGCTGTGCTC GGCGTCGTCG ACGGGGAACC GCCGCTGGGC
ATCGAGACCA CCGCCGATAT CGCCGACCGG AAGCAACTGC TGCGGCAGAT TGGCTACAAG
CTTTGA
 
Protein sequence
MELSAVPVSK PADTNFIFGQ SHFIKTVEDL HEALVGTVPG IRFGIAFCEA SGKRLVRWSG 
TDEAMIDLAC QNATAIAAGH TFLIFLGGGF FPVNVLGAVR AVPEVCRIYC ATANPTEVIV
AQTDLGRAVL GVVDGEPPLG IETTADIADR KQLLRQIGYK L