| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5328 |
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| Symbol | zneC |
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| ID | 4042189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 2037435 |
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| End bp | 2038970 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637980746 |
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| Product | heavy metal cation tricomponent efflux outer membrane porin ZneC |
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| Protein accession | YP_587456 |
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| Protein GI | 94314247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.998587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.685908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA TCACTTCGAT CAGCGTGGCG ACGCTGCTGG CGCTGGCCAC CGCGGGTTGC
GCGGTGGGCC CGGACTTCCA GCGCCCGGCC GCGCCCGAGA CCGATCGCTA CACGGCGACG
ACATTGCCCG CGGAGACCGC ATCGGCATCC ACGCCGGATG GGCAGGCGCA GCGCTTCGCG
CCGGGGCAGG ATGTGCCGGC GCAGTGGTGG ACGATGTTTG GCTCCAGCGA ACTCAACGCG
CTGGTGGACG CCGCATTGCG CGCGAACCCG GACCTGCAGG CGATGGAGGC CGCGCTGCGC
GTGGCCCAGG AGAACGTAGC GGCGCAGCGT GGCGCGTTCT TCCCGAGCGT TGACGCGTCG
TACACGCCGT CGCGCCAGAA GATCGCCCAG ATCATCGCGA GCCCGCTGTC CGACAACAGC
GATCTGTTCA CGCTGCACAC GGCGCAGTTG AGTGTCTCGT ACGTGCCCGA CGTCTTCGGC
GGCACGCGCC GGCAGGTGGA GTCAGGCGTG GCGCAGGCCG ACGTTGCCCG GTTCCAGTGG
CAGGCCGCGT ACCTGACGCT GACGTCGAAC GTCGTCAATG CGGCAATCCA GGAAGCCTCG
CTGCGCGCCC AGATCCGCGC GACGCAAGAC GTCATCGCGC TATCCACGCG CCAGCTCGAG
GCCGTGCGCA AGCAGCAGCG CCTAGGGCAG GTCGGCGCCG CCGAGGTCGC CGCACAGGAA
GCCACGCTGG CGCAGGCGGA AGCGGCATTG CCGCCGCTGG ACCGGCAACT CGCCCAGCAG
CGCAACCTGC TCGCGGCATT GACGGGCCGG TTGCCGAGCG ACGCCGTGCC GCAGCAGTTC
GAGTTCGAAG CGCTGACGCT GCCCGGGACA TTGCCGCTGA GCCTGCCGTC GAGGCTGGTT
GGCCAGCGCC CCGATATTCG CGCGGCGGAA GCGCAGATGC ACGCGGCCAG CGCCCAGATC
GGCGTGGCCA CTGCGGCCCG CCTGCCGAAT ATCACGCTGA CCGCCGCGCT CGGTAGCTCG
TCGCAGGCGA TTGGGGATCT CTTCACGGCC GGCACCGGCT TCTGGGGAAT CTCCGCGGGC
CTGATGCAGC CGATCTTCAA GGGCGGGATG CTGCTGCACC AGCAGCGCGC GGCCGAGGCG
GCCTACAAGC AGGCATCTGC GCAGTACCGC AGCACGGTGC TGACCGCCTA TCAGGGGGTG
GCCGACGCGC TGCATGCGAT CGAGGCCGAT GCGCGGGGAC TGCGCACTGC ATCGGATGCC
GAGCGTGCCG CGTACCGGAG CTTCAACATC GCCCAGGCGC AGTGGAAGGC CGGACAGATC
GGTTACCCGG CCGTGATGCT GGCCGAGCAG ACGTATCGGC AGTCGGCGAT CACGCTGGTA
CAGGCGCGCG CGAGCCGTTA CTCCGATACC GTGGGCCTGA TGCAGGCGCT GGGCGGAAGC
TGGGAGGATG AACCGGGCAA GACGCCGGAG AACCAGTCGG ACAGCAAGCC GGCCGCAGCG
CCGGAGGCCG TCGGCAAGGC TCAGGGTAAC GGCTGA
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| Protein sequence | MAKITSISVA TLLALATAGC AVGPDFQRPA APETDRYTAT TLPAETASAS TPDGQAQRFA
PGQDVPAQWW TMFGSSELNA LVDAALRANP DLQAMEAALR VAQENVAAQR GAFFPSVDAS
YTPSRQKIAQ IIASPLSDNS DLFTLHTAQL SVSYVPDVFG GTRRQVESGV AQADVARFQW
QAAYLTLTSN VVNAAIQEAS LRAQIRATQD VIALSTRQLE AVRKQQRLGQ VGAAEVAAQE
ATLAQAEAAL PPLDRQLAQQ RNLLAALTGR LPSDAVPQQF EFEALTLPGT LPLSLPSRLV
GQRPDIRAAE AQMHAASAQI GVATAARLPN ITLTAALGSS SQAIGDLFTA GTGFWGISAG
LMQPIFKGGM LLHQQRAAEA AYKQASAQYR STVLTAYQGV ADALHAIEAD ARGLRTASDA
ERAAYRSFNI AQAQWKAGQI GYPAVMLAEQ TYRQSAITLV QARASRYSDT VGLMQALGGS
WEDEPGKTPE NQSDSKPAAA PEAVGKAQGN G
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